Detail



ID : Ahg904695

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904695|Al_scaffold_0003_1823
Sequence
ATGTATTATC CTGCTTATTA CTGTTCAGGT TATGATTCAT CTGTCGAATG GGAGAACCGT CAGGTTATTC TTGGTGTAGA TGGTTCAGAG GTCCAATACA CGGGTGGGCA AAATGAAAAT TCTCCTTATA TCTGCTATAC ACCAAGTTAT GGATATGCAC AGTCTCTCTA CAATCCCTAC AATCCTTACA TACCAGGCGC ATCAATAGGC GTTGACTCTT CTTTTCTTGG ATTCCAACAA TATTACTCAA ACCCTCCCTA TGAAAATGCT GCATCTTCAC CTACTTATGC TCCATATGTT ATTCAGCCTG ATATGGTCTC GAATAGTTCA ACAGACTCTT TGGCAACAAC TGACTTAGCC AATGGTGGTC AATCTGATGG AAGAGGTTCC AAGCCGAGAA GTGCTTCAGC AATTGCCGTA TTTCCAAAAG ATGCTCCAAA ATCTTCGACA GTGAATTCCT TGGGTATGAC CCATGGGAAG CTAACGTCTA ACACTGGCCA GAATAAACAG CCAGGAATCC CCAAGAATGT TTCCCCAACA GCTTCCGCGC ATTCTCTCCA GGGAAAAACT GCCTCCGTTG ACACTGTTTC CAGTAGCAGA CTCTCGTCTT ATGGGCACTT TGACATTGCT AAAGGGTTTC CATCCATTGT TTCAAATAGT TGCAAGCCTC GTTCCAAGAT GTATGATAGC AGAGGTGATA CTGACGTAAC TGGAAGTCCA GATACGAGTG AACAAAATCG AGGTATAAGA ACGAGAAGAT CAAGAAATCA ACTAATTGTC AAAGCTTATA CAACCAAAGC TGGAAACGTT GATTCGGAAG GAAACATTGT GATAAGTCCT GATCAATATA ATAAAGAAGA TTTCAGTCTT GATTACAGCG ATGCCAAGTT TTTTGTGATT AAATCGTATA GTGAAGATGA TGTTCACAAG AGCATCAAGT ATGGTGTCTG GTCATCAACA TTGCATGGGA ACAAGAAATT GCAGGGTGTA TATGAAGATA CTCAGAGAAT ACCCACTGAG AAGTCTCGTG AATGTCCTAT TTTCTTATTC TTTTCTGTCA ATGCCAGTGG TCTGTTCTGT GGCGTGGCTG AGATGACCGG TCCAGTTTCC TTCGACCGCG ACATGGATTT TTGGCAGCAA GACAAATGGA GTGGAAGCTT TCCTGTCAAG TGGCACATCA TTAAAGATGT TCCTAATAGC TATTTCAGGC ACATTATTTT ACATAATAAT GAGAATAAGC CAGTGACCAA CAGCCGAGAC ACACAAGAGA TAATACTGAA ACAAGGACTC GAGGTGCTAA AACTATTCAA AAATCATGCG GAAAAGACTT CACTATTAGA TGATTTTATG TACTACGAAA ACCGCCAGAG ACTCATGCAG GAAGAGAGAG CTAGACTTCC ATTCAGGACC TTTCGCAGGC CATTTCCCGT GCTTAAACTA GATTGTTATG ACAGAAGCAA GAAAAGCTCC AAGGATGTCG TCAAGAAGCC TCCAGTGACC TCTGCAGAAA CAAAAGGTGT GCAGTTAAAA AACTCAGATG GGAATGAAAA GAGCAATCCA CAGGAAGCAA CAGAAGATTC TACTCCTTCA ACTCTGAAGA TTGGTTCTCT CACCATTAAA CCGACTGCTG GTACCACCTT TAACCCGACC CAAGCCAAGT CTAAACCGGC CCCATCTCTC AGCTCTGATC ACAAGTCAGA CTCTTCTGAA GAGGTTACTG GGTCTCTGGC TGATGACATC CTCAGAGTAG GATCGTTGCC CATAAAAGTA AAGGTATCTG CAGATTCATC CTCGAAGATC GTAGCGGTTG GTACAACTCT TCTCAACTCA AGATCAGTTC AGAAGTAA 
Length1848
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6960565.. 6962914
Download Sequence
A.thaliana
AGI-codeAT3G17330.1
Descriptionevolutionarily conserved C-terminal region 6
TAIR curator summary
Alias[ECT6][evolutionarily conserved C-terminal region 6]
Gene coexpression
MR
MR Locus Description
6 Ahg491670 Tetratricopeptide repeat (TPR)-like superfamily protein
12.1655 Ahg900847 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
14.6969 Ahg481966 Phototropic-responsive NPH3 family protein
29.4618 Ahg492028
30 Ahg483835 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
31.749 Ahg475252 NSP-interacting kinase 3
32.6497 Ahg905007
33.0454 Ahg940406 conserved peptide upstream open reading frame 41
34.4674 Ahg478575
34.8999 Ahg936544
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression