Detail


ID : Ahg491716

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491716|fgenesh2_kg.7__1149__AT4G30360.1
Sequence
AAACAAATAT CCTTCCGAGT TCTGACTCGT CCCCGTGACT CAGTGGTTCC CTCCTTCAAT CAATCCTCTC CGGAGGAATT AAACAAAACC AACAATTTTT CTCAGATTTA GAGAGAGAGT AAGAGTGAGA GTGTCAGAGA CGTGAATCAA AGAAATGATT TTTAAAAACT TGTGTTCGTA ATTTTGAAGG TTTTTTTTTT TACTCGAGCT TGAGCTTCTT CTAATGGAGT TAAGGAAGGA CAAGCTTCTT ATGTTTTATT CAGAGGGGAA AGAACGCAAA GAAGCTATCT GGGCAGTGAA TGACCCAATG AGCAAATCTT ATAAGCTCTC TTTACCTTCA GCACTAAGAC CTGATAATCT CTTACCTGGA AATAGACTTA GATACACTGA TGCTTCTAAA TCCAAATCTT CCAAAGTCTC ATGGTACAAG ACAATTCTTG ATCCAGGAAG TGAGATTGTC TTGAAATGGA ATTGGGTCTT CATTGTCTCG TGTATGGTTG CTCTTTTCAT CGACCCGTTG TATTTCTTCG TGCCAGCTAT AGGAGGAGAT AAAAACTATC CATGTGCAAG GACTGATACG AGTTTAAGCA TTCTTGTTAC GTTCTTCAGG ACAATTGCGG ATCTTTTCTA CTTGCTGCAC ATTTTCATTA AGTTTAGGAC TGGTTTCATT GCGCCTAATT CAAGTACTAG AGTGTTTGGT AGAGGTGAGC TGGTGATGGA TTCTAAGGCA ATTGCTTGGA GGTATCTTAA ATCTGACTTC ATCATTGATC TCATCGCGAC GTTACCACTT CCGCAGATAG TTATCTGGTT TGTTATATCG TCCACAAAAA GTTACCGGTT TGATCATAAC AACAATGCTA TTGCTTTGAT TGTGCTCCTC CAATACACCC CAAGGTTCTA TTTGATAATT CCGTTAAGTT CTCAAATCGT CAAAGCGACT GGAGTGGTTA CAAAGACTGC GTGGGCTGGA GCTGCTTATA ACCTTTTGCT ATACATGCTA GCTAGTCATG TACTTGGTGC TGCGTGGTAT ATATTATCGG TCGATAGATA TACATCGTGC TGGAAATCAC GATGCGACAG AGAACGTGGC CTAGTTAATT GTCAGCTATA TTACTTAGAC TGTGATTCAA TGTATGACGA CAATCAGATG AATTGGGCAA ATGTCACAAA AGTGTTTAAA CTCTGTGATG CACGGAATGG CGAGTTCAAT TATGGGATAT TCGGGAACGC AATCACGAAA AAAGTTGTGT CTTCAAACTT CTTCGAGAGA TATTTCTACT GTTTGTGGTG GGGATTGCAG CAGCTTAGTT CTTATGGACA GAATTTGTCC ACGACCATGT TCATGGGCGA AACCACATTT GCTGTTCTCA TTGCAATCTT TGGTCTTGTC CTCTTTGCCC ATCTCATTGG GAATATGCAG ACATATCTGC AATCTTTGAC TGTACGGCTT GAGGAATGGA GATTGAAGAA AAGAGACACT GAGGAGTGGA TGAGACATCG TCAACTTCCT GAAGAATTGA GAAACCGTGT GAGACGATAT GAGCAGTATA AGTGGCTTGC AACAAGAGGA GTCGATGAAG AGGTTCTGCT GCAAAGTTTA CCCACTGATC TTCGCCGTGA TATTCAACGT CACCTATGTT TAGATCTCGT TCGAAGAGTC CCATTTTTCT CTCAAATGGA TGATCAGTTA CTCGATGCGA TATGTGAGCG CCTGGTTTCT TCTCTGTGTA CCGAAGGGAC ATACCTTGTA CGTGAAGGTG ACTTGATCTC AGAGATGCTC TTCATCATCA GAGGTAGACT CGAGAGTTCC ACAACCAATG GAGGCCGAAC CGGTTTCTTC AACTCGATTA TACTTAGACC TGGAGATTTC TGCGGGGAAG AACTTCTTTC TTGGGCTTTG CTTCCAAAAT CAACCTTGAA TTTACCATCT TCTACAAGAA CAGTTAGGGC TTTAGTAGAA GTCGAAGCAT TTGCTCTTCG AGCTGAAGAT TTGAAGTTTG TTGCAAATCA GTTTAGGCGG TTACACAGCA AGAAGCTTCA ACATACTTTC AGATTCTACT CTCACCATTG GAGAACTTGG GCTGCTTGCT TCATACAAGC GGCTTGGCGC AGGTACAAGA GAAGAGTTAT GGAGAATAAC CTCACTGCGA TTGAAACAAT GGAAAATGAA GAAGGAGAAG TAGGAGAAGA AGTAGAAGAA GAAGAAGAAG AGTGTGTTGA GGAGAGTCCT AGAACAAAGA TGAACCTTGG AGTTATGGTT TTGGCATCGC GTTTTGCAGC TAATACAAGA CGCGGTGTTG CAGCTCAGAG AGTTAAGGAT GTCGAATTGC CTCGGTTTAA GAAACCAGAA GAGCCTGATT TCTCTGCTGA GCATGATGAT TGACTGATTT ATAACCAGGA AAAGAAGCTG ACTTTATTTC ACAGGAGATT TTTATGACAA GAACACTACA GATTAAGTTT CCTGGTCCTT TGGGAGACA
Length2479
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4505139.. 4508265
Download Sequence
A.thaliana
AGI-codeAT4G30360.1
Descriptioncyclic nucleotide-gated channel 17
TAIR curator summarymember of Cyclic nucleotide gated channel family
Alias[ATCNGC17][CNGC17][CYCLIC NUCLEOTIDE-GATED CHANNEL 17][cyclic nucleotide-gated channel 17]
Gene coexpression
MR
MR Locus Description
10.1489 Ahg491819 protein kinase family protein / WD-40 repeat family protein
12 Ahg342773 Magnesium transporter CorA-like family protein
16.2481 Ahg479458 PTEN 2
19.799 Ahg479191 ubiquitin protein ligase 6
22.4499 Ahg479142 F-box and associated interaction domains-containing protein
26.8328 Ahg492087 Ypt/Rab-GAP domain of gyp1p superfamily protein
31.1448 Ahg328224 BR-signaling kinase 1
35.1426 Ahg924037 Galactose oxidase/kelch repeat superfamily protein
37.3898 Ahg355042 pleckstrin homology (PH) domain-containing protein
40.2989 Ahg496505 tetratricopeptide repeat (TPR)-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression