Detail



ID : Ahg492274

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492274|fgenesh2_kg.7__1707__AT4G25520.1
Sequence
TTTCTGATTT TAGGGATTTG TGCAACTCCC AAGTCGATTC CTTTGACACT TTCTGGGTTT TGATTTGAGC TGCCGATTGG ATTTAAAGTT TTAGTCTTGT TTGGATTCTG CGAGGACGGT TTAAAGTTTC AAGCTTTTCA TTCCTTTGGA CGGCTTGATC TGTATCTGCT CTCGTGAGGG CATGAACAGA ACGGCGGTCT CAGGAGCTGT CGAATCGAGT TTCTCATTGA CTGATGCTCT TGGTACGGAA GCTCTAAATA TGCAGAGGAG CAGTGGCATC AATAATAATA TGCGTATCCC AACATCACCA ATGTCTTTCT CCTCGAATAG CGGTAACATG CCTGGTTCAT TAGTTCTTGA TGGCTCTGCT TCAATGCAAC ACTTACCTCA GCAGCAGCAG CAGCAGCAAC TACTACAACA GCAAGCAGGA CAAGGTTCAG TTCCAATGAG GGAGAACAAT TATTCCCATG TGGATAAGAA ACCCAGATTA GAAGTGAAGC AAGAGGATAT GTTGCAGCAG CAGATTTTAC AGCAGTTGAT CCACCGTCAG GACCCCACGG GGAGGAATCC TCAATTCCAA GCTTTGCTTC AGCAGCAGAG ACTCAGGCAA CATCAGCAGA TGCTTCAATC CATGTCACCC TCTCAGAGAC TCCAACTTCA GCAGCAGCAG CAGTTGAGAC AGCAATTACA GCAACAAGGA ACCCAACAGA TTCCTCCTAA TGTACGTCCT TATGAAGTTG GCGTGTGTGC TCGGAAATTG ATGATGTACT TGTATCATCT GCAGCAACGG CCTGCTGAAA ATTGCATTAC CTATTGGAGG AAATTTGTGG CAGAATACTT CTCACCTCGT GCAAAGCAAA GGTTGTGCTT GTCACAGTAC GAAAGTGCTG GGCACCATGC ACTTGGCATG TTTCCACAGG CAGCTCCGGA TATGTGGCAG TGTGATCTTT GCGGCACCAA GTCTGGAAAG GGATTTGAGG CAACGTTTGA TGTGCTTGCC AGACTTATTG AAATCAAATT TGCAAGTGGT ATTATTGATG AGCTCTTATA TCTGGATCAC CCTCGAGAAA ACAGATTTCC CAATGGACTG ATGATGTTAG AATATAGAAA AGCAGTTCAG GAAACTGTAC ACGAGCAGTT CCGTGTTGTC CGTGAAGGCC ATCTTCGTAT CATATTCTCT CAAGATCTGA AGATACTGTC TTGGGAGTTT TGTGCTCGGC GTCATGAAGA GCTTCTTCTT CGCAGACTTA TTGCTCCGCA GGTGAACCAG TTACTTCAGG TTGCACAGAA ATGCCAGAGC ACGATTTCAG ACAGTGGGTC AGAGGGAGTT TCTCAGCAGG ATTTACAGTC AAACAGTAAC ATGGTCTTGG GAGCTGGACG GCAACTGGCA AAGTTCATGG AATTACAGTC GCTGAATGAT CTTGGCTATC CAAAAAGATA TATCAGAACT CTACAGATAT CTGAAGTTGT CAAGAGCATG AAGGATCTGA TGAATTTCAC TGGCGAGCAC AAAATCGGTC CTATTGAAGG GTTGAAACGG CTTTTGGAAC AGACGGTGAC AGTGAAGATC CAGAGACAGA AAATGCAAGA GATGGAGCAG TTTGGGAATA GCGAATCTAT GAATGGGCCA GCTCAAGCTC AAATGGCTTT AACTTCAGGA ACAGTGAATG GCTCAACTGG CAACAACGCC AATAATAACC ATCAAATTGT TGGTCGTGGA GCTATGAGTG GGCCAGCTCA AGCTCAAATG GCGTTATCTT CAGGTATGAT GAGCGGTTCA ACTGCCAACA ACAACTCCAG TAATCACCAT CAAATTGTTG GTCGTGGAGC TATGAATGGC TCAGCTCAAG CCGCAGCAGC TCTGACCAAC TACCAAAGCA TGCTTATGAG GCAAAATGCT ATGAATAACC CAAACTCAAA TACGGGTAAA CAAGAGGGGT TCTCGAGTCA GAACCCAACC CCGATTTCAA ACCAGAGTAC ATCTTCTTCA TCCCATCAGA GGCAGAACTT AGTTACAGGT GGATTTCCCA GCTCTCCTCA AATGCAACAG CAGCAGCGCA CCATGAATGG CCCTCCCAAC ATACTTCCGC AGAATCATCC TCATCAGTTG CAATCACCAC AGTCACATGG TAACACTCCG GAGCAGCAGA TGCTTCATCA GCTGTTGCAG GAGATGTCTG AAAATGGAGC GAGTGTGCAA CAGCAACAAG CCTTTTCGGG TCAAAGTGGT AGCAACAGTA ACGCAGAGAG AAACACAACG GCCTCTACTT CCAACATCTC AGGAGGAGGC CGAGCTCCAA GCCGAAACAA CAGTTTTAAA GCAGCCTCAA ACAACAACCT TCATTTTTCA GAAGATATAT CGATTACAGA CCATGATTTC TCAGAAGATG GCTTCTTCAA CAACAGCGAT ATCTATGGTG GCTTGTAATA TCCCGACAGA ACAGAGGCAT TGTTACTTTG ACTTAACACA GTGAAAAAGA CTTTAGGGCT TATTTTTCTC ATTTAGGCTG GTCTTTGTAT AGAAACCAAA GAGATATGAG GCCGGCCAAT GAAGGAATTT GTGATTTGTT GTAACCTATC TATAGGAACT TTTAGCATCT TCAATTTTTT CCCTTTTAGA GATAGATGAA ATCTTAGATT ATGATTCTGC AGACACTTTC AAGTAATCTT ATT 
Length2673
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6598425.. 6602548
Download Sequence
A.thaliana
AGI-codeAT4G25520.1
DescriptionSEUSS-like 1
TAIR curator summary
Alias[SLK1][SEUSS-like 1]
Gene coexpression
MR
MR Locus Description
1 Ahg492703 DNA-directed RNA polymerase family protein
7.48331 Ahg934753 Integral membrane Yip1 family protein
12.0416 Ahg484812 Leucine-rich repeat (LRR) family protein
16.8523 Ahg496915 mitogen-activated protein kinase kinase kinase 5
17.4356 Ahg490828 LisH/CRA/RING-U-box domains-containing protein
18 Ahg311699 ENTH/VHS/GAT family protein
24.5357 Ahg476734
38.1051 Ahg901754 ENTH/VHS/GAT family protein
38.9615 Ahg315410 binding
41.5692 Ahg485730 UDP-glucuronic acid decarboxylase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression