Detail



ID : Ahg492408

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492408|fgenesh2_kg.7__1841__AT4G24390.1
Sequence
GAGAGAGTCC AAACTCAAAG ACCAGCTCCT CATCTGAATC GGACTTTGTA TCAGAAAGAG AATAAAATTC TGGATCATTT ACTTGTATGA CAGAAGAAGA GAGCTCAGCG AAAATGTCAG AGGATGTTGA GCGATATCTC AAGTTAAATC CACCTTGCTC CTCCGCCGTT GCGTCTCGCA CTTTCAAATC TTCTACGCCG CCATGTCCAG AACATGTCCT CGAGAACGTG TTAGAGAACG TGCTTCAGTT CCTCACTTCC AGATGCGATC GCAACGCCGT TTCATTGGTC TGCAAATCGT GGTATCGCGT CGAGGCTCAG ACCCGATTCG AGGTTTTTAT CGGTAACTGT TACTCTCTTT CTCCTGCTCG GCTCACTCAC CGGTTCAAGC GTCTTAGGTC TCTTGTGCTT AAAGGGAAAC CTAGGTTTGC TGATTTTAAT CTCATGCCTC CTAATTGGGG AGCTCAATTC GCGCCTTGGG TTGCTGCAAC AGCTAAGGCT TATCCTTGGC TTGAGAAGGT TCATTTGAAG CGTATGTTTG TTACGGATGA TGATTTAGCT CTTCTTGCTG AGTCGTTTCC TGGGTTCAAA GAGCTTACTT TGGTCTGCTG CGAAGGTTTT GGGACTAGTG GTATTGCTGT TGTTGCCAAC AAATGCAGAC AGCTAAAGGT TCTTGATCTG GTGGAGTCAG AAGTCACCGA TGATGAGGTG GATTGGATTT CTTGTTTTCC TGTGGGTGAA TCTCCTCTGG AGTCTTTGTC TTTTGACTGT GTTGAATCCC CTATCAATTT CAACGCATTG GAGGGGCTCG TGGTTAGGTC ACCGTTCTTG AAGAAGCTTA GACCCAACAG GTTTGTTTCC CTTGAAGAGC TGCATCGACT AATGGTTCGA GCGCCGCAGT TAACCAGTCT TGGTACGGGT TCATTTAGTC CCGACAACGC GCCTCAGGGT GAACAACTAC CGGATTATGC AGCTGCTTTC CTTGCTTGTA AATCCATAGT TTGTCTCTCA GGATTCAGGG AATTCAGGCC TGAATACCTC CTAGCTATCT CTCCAGTTTG TGCTAATCTC ACCTCTCTTA ACTTCAGTTA TGCTAACATT TCTCCTCACA TGCTCATGCC CATCATACGC AACTGTCACA ATATCCAAGT CTTCTGGGCT CTTGACTCGA TACGCGATGA AGGACTACAG GCAGTGGCTG CCACATGCAA GGAGCTCCGT GAGCTTCGGA TTTTCCCTTT CGATCCTCGT GAAGACAGCG AAGGTCCTGT CTCAGGAGTA GGCCTGCAAG CAATATCAGA GGGATGTAGG AAACTAGAAT CTATCCTGTA CTTTTGCCAG CGGATGACTA ATGGAGCTGT GACAGCCATG TCTGAGAACT GCCCGCAGCT TACTGTGTTT AGGCTTTGCA TAATGGGTCG CCATAGGCCT GACCACGTGA CAGGAAAGCC AATGGACGAT GGATTTGGTG CCATTGTTAA AAACTGCAAG AAGCTAACCC GACTTGCAGT GTCAGGGTTA CTAACAGATG AAGCTTTTAG CTATATAGGA GAATATGGGA AATTGATCCG CACGTTATCT GTAGCTTTTG CTGGGAACAG TGACAAGGCT CTGAGATATG TTCTTGAGGG TTGTCCTAAA CTACAAAAGC TTGAAATCAG GGACAGTCCC TTTGGGGATG CTGGATTGCG CTCTGGTATG CATCGGTATT GCAACATGAG GTTTGTTTGG TTGTCGTCAT GTGTCTTATC GCTGGGAGGC TGCAGGGATG TTGCTCAGGC TCTGCCTAAT GTAGTGGTGG AAGTATTTGG ATCAGATGGT GATGATGACG ACGACACTGT CACTGGGGAT TATGTTGAGA CATTGTACTT GTATCGGTCC CTTGATGGCC CAAGGAAAGC TCCAAAGTTT GTAACAATTT TATGAGAAAA AACTTTGGTT CAGATGATGC CGTGCTTGAG GAAAAGCAAA GCTAGCTAGC AGAAGAGAAT GTGTTTGTAA ACTATGCTCA ATGGTATCGA TGAATGCGGT AACTATCTCC AAGCTTTTGT CATCAAGCCT CGGGACAGTA TGGCCTTTGG GATGATGGAC AACCACCGGA TTCTTGTACG ATTCTATCAG CTGGGTTCCG TAAGGTTTCA AGAAATCAGT CTCTCCTGCA ACAAACAAGC CAGATACCAG ATTCTCAATC ATCAATGAAC AAGCTTTTGC AGAATTTACA AATCAGCTTT TGCAGAATTT ACCTAAAAAG TGGAGGGAGA GAGTTTCCAA GGAAGACGAA TAAGCATTCT CCGCCAACTT GGCGGATTTG AGCTTAGCTC CTCCAATGAT TATAATAAAC TTAATCTTTG GTACTTTCTG AAGTGCAATT CCCTGCACAA TTTTCAAATG TATCAGAAAC AGCATTTGTA AAAATGATCA TGAATACTAT AGT 
Length2433
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7081868.. 7084878
Download Sequence
A.thaliana
AGI-codeAT4G24390.2
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias[AFB4][auxin signaling F-box 4]
Gene coexpression
MR
MR Locus Description
5.91608 Ahg496574 Regulator of chromosome condensation (RCC1) family protein
17.4356 Ahg470498 Protein of unknown function (DUF1068)
17.4356 Ahg474140 target of rapamycin
19.2614 Ahg488531 Plant protein of unknown function (DUF827)
20.7846 Ahg927990 Ankyrin repeat family protein
24 Ahg933777 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
25.7682 Ahg950590 smr (Small MutS Related) domain-containing protein
27.1109 Ahg478644 SNF2 domain-containing protein / helicase domain-containing protein
28.931 Ahg481325 Transcriptional factor B3 family protein
28.931 Ahg478777 galacturonosyltransferase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression