Detail



ID : Ahg478829

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478829|fgenesh2_kg.3__1530__AT3G14160.1
Sequence
ATGCATTGTG ATCTTGTGAA TAGGATGAAA GATGTTACGT TGTTTTGCCA GGAGTCTGTG TCTCCTGCAA GTGTTGAGCT TTCTAGTGTT GAGGAGCATA AGAGTGCTCA AAAGGCTGAT GAGGCAGGGA ACTCTTCAAA TGAAAGCAGC ACAAGACATT TTGATCTCTT TCTCATGAAG AAGGGGATAG TACTAAAACC CAGTCTTATG GAAACGAACA GAGTAAAGAA GAAAGCAGCT AAAGGGTACA CTGGAATTGT TATTAGACCT GGAATGGTTC TTCTCAAGAA CTACTTGTCA ATCAATGATC AAGTAATGAT TGTTAACAAA TGCCGTCAGC TATGTTTGGG TGAAGGGGGC TTCTATCAAC CAGGTTACAG GGATGAAGCG AAATTGCATT TGAAAATGAT GTGCCTTGGG AAAAACTGGG ATCCTGAAAC ATCTCGATAT GGAGAAATCC GACCGATTGA TGGTTCTACT CCGCCAAAAA TTCCTGCTGA ATTCAATCAG TTTGTTGAGA AAGCAGTTAA AGAATCACAG TCCCTAGCGG CCTCATCAAA TTCCAAGGAG ACAAAGGGAG AAGATGGAAT ACCATTTATG TTACCTGACA TCTGTATTGT TAACTTCTAC ACATCTACAG GGAGACTTGG TCTCCATCAG GATAAAGATG AGAGCGAAAA TTCCATTCGG AAGGGATTAC CTGTTGTTTC ATTTTCTATT GGAGATTCAG CCGAGTTCTT GTATGGTGAT CAGAGGGATG AAGACAAGGC TGAAACGTTA ATCTTGGAGT CTGGAGATGT TCTAATATTC GGTGGAAGAT CAAGAAAAGT CTTCCATGGC GTCAGATCAA TTTGTAAAGA TACTGCCCCC AAGCCTCTTG TTCAGGAAAC GAGTCTCCGA CCAGGTCGTC TGAATTTGAC TTTTAGACAG TATTAGCCCA AAGCTAGCAA CTTTGGTTAT GTATCTAGCA CTGTCACCTG CTTGACACAT TTGTTTTTTC CACACACGAT CTGTGTTATA TTATAACGTC TTTGCAATAT GATTGGTTTT TCTCTTTCTT CTCCGGAGTA GCAGCATGGA TCCAGTGTCT ATCGCTTCTT CTTAATTAGA TTGTTATGTT TTGTTTCAAA AAATTACTGT TTCTCAGTTT ATTTATCTCT TCTGTCTACC ATTCCCTGTA ACCCATTCTA CCTTTTCAAC TTTGTAAGAA TTGGAGAAGA TTTTGCGATT CTGGTTGAAA TTGTACTTGT CTTGTTTTCC 
Length1260
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5550378.. 5551943
Download Sequence
A.thaliana
AGI-codeAT3G14160.1
Description2-oxoglutarate-dependent dioxygenase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5 Ahg493879 Protein of unknown function (DUF 3339)
34.7707 Ahg495713
39.6485 Ahg317848 NAC domain containing protein 52
42.4971 Ahg481149 P-loop containing nucleoside triphosphate hydrolases superfamily protein
49.8999 Ahg917653 type one serine/threonine protein phosphatase 2
65.5744 Ahg915259 zinc finger (C3HC4-type RING finger) family protein
71.2461 Ahg496115 methyl-CPG-binding domain 7
72.9931 Ahg320337 Phox (PX) domain-containing protein
78.9937 Ahg492485 Leucine-rich repeat (LRR) family protein
88.4873 Ahg896329 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression