Detail



ID : Ahg929447

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929447|scaffold_301904.1
Sequence
TATTTTATTT CGAATTCGAC ATGGATACGA GCAGGAGAGC TGTAGAATCG TATTGGAGGT CGCGGATGAT AGATGGGGTT ACGTCTGATG AGGACAAAGT AGCGCCTGTG TACAAATTGG AAGAGATCTG TGACCTCCTT CGTTCTTCTC ATGTCAGCAT CGTCAAGGAG TTTTCTGAAT TCATTTTGAA ACGTCTTGAT AACAAAAGCC CTATTGTTAA GCAGAAGGCT CTTAGGTTGA TAAAGTATGC TGTGGGAAAG TCTGGATCAG AGTTTAGACG AGAAATGCAA AGGAACTCGG TTGCAGTGCG CAATCTATTC CATTACAAGG GGCATCCAGA TCCTTTAAAA GGGGATGCAC TTAATAAGGC TGTACGGGAA ACTGCTCATG AAACAATATC TGCTATATTC TCGGAAGAGA ACGGTACTAA ACCAGCTGCT CCTGAAAGCA TCAACAGACG CATTGAAGGA TTCGGGAATA CTAACTTTCA GGTGCCCTCA AATGATAATA AATCGTTCCT GAGTGAGGTG GTGGGTATTG GAAGTGCATC TATAAAGCAA GGAATCAGTA ATTTTGCTCA AGGCCATTTG CCAAAGAAGA ATGAGAATGG AAGCAGCAGC TACAGAGGTC CAAATCTCCA CAGATCATTA ACTATGGAAA ATGAGAACTT CAGTAGATAC GATCCAGTTA AGCTGGGGAA GGATGGTAAC TACGGAATGT CTAAGAACAC TACTGGTGGA TCTTGGGGCC ATGCTTCCGG AGAAGCAAGT GAAAGTTCTG CTTCAGTTCG TGTTGAGAGC AAAACTCGTG AGGAAAAGCT GCTGGAAACC ATTGTTACAT CTGGCGGTGT ACGCCTGCAG CCAACTCGTG ATGCTCTTCA TGTTTTCATT TTAGAGGCTG CAAAAATGGA CGCTGTTGCT TTAAGCATTG CTCTTGACGG GAAGCTCCAG TCCCCAATGT GGCAGGTTCG GATGAAAGCT TTATGTGTCC TTGAGGCCAT TTTGAGGAAG AAGGAAGATG ATAATTTTTC AATTGTACAT ACCTATTTTA GTGAAAACAT GGATGCCATA CAGCGATGCT CAGAGTCTCC GCAATCTTCC CTTCGAGAAA AGGCTAACAA GGTTCTGAGC CTTCTAAATG GTGGACAGTC AAGTGGGTTG ATGAGCAGCT CAGATAATAC GGTGAAGCGA GAGGCTGCTG TAGATTTACC TGACTTGATC GACACTGGTG ATTCAGACTA TATAACAGAA GATACTTTGA ACAATCTGAA TGCTATAGAT ACTGGCAGTA CTGTGGCGAA AGCAGCTCCA TTGATGGATG ATGATTGGTT TGGGGATAGC TCTGACACTG TACTGAGTAG CAGCGAGATG AAAAATGATG ACGACCCCTT TGCAGATGTA TCATTTCATC CGAATGAAGC AAAAGAAAGT GCAGATGACC TGTTCTCTGG AATGACTGTC GGGGAAAAGT CCGCTGCTGC TGGTGGTAAT CATGTGCCTG AGCTATTTGA TATGTTTGGG TCAACTGCAA AACTTGAAGC AGAGCCAAAA GATTCAAAAA ACATAAATGA TTTGATGGCA AGTTTCTCCA TTGACGAAAA CATTTCAAAT CAGAAAGGCT CGTCTTCAAG CACCCTTCCA AAAGATTTAT TTGCAATGCC GAGTACCACC AGCCACCAAG CACCGGAAAA TCCTGTTGGA GGGATTCTTG GCTCACAAAA TCCTGGGTTT ATTCAAAACA CAATGCTTCC TGGGGGTGTT ATGCCCTTCA ATTTTCCTCC AGGGATGATG ATGAATCCAG CTTTTGCATC CCAACCTTTG AATTACGCTG CCATGGCAAG CTTGTTAGCT CAGCAGCAGC AGTACCTTGG TAATATATCC AACTTCCAGC AGTTTGGCAA CCTGAACGCT CAGGGGAGCG GAAATGTTCT TTCTATGGGT ACTAGTGGAG GGAATCAGTC CGCACTCCCT GATATATTCC AGCCAAATTT TGGTAATCAG GCTCCAACCT CAACAATGAA TGGTTCGAAA AAAGAAGATA CCAGAGCCTT CGATTTCATC TCCGATCATC TTGCATCAAC CCGCGACACA AAGAGAGTAT CTTGATGCTT GCTTACAAAA TTCCGC 
Length2126
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6484785.. 6487634
Download Sequence
A.thaliana
AGI-codeAT3G16270.1
DescriptionENTH/VHS family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg472400 Calcium-binding EF hand family protein
5.65685 Ahg483451 RNA binding
12.8062 Ahg480637 Endoribonuclease/protein kinase IRE1-like
13.9642 Ahg486396 ENTH/VHS family protein
14.4914 Ahg478183 ARM repeat superfamily protein
16.5831 Ahg944199 BES1/BZR1 homolog 2
19.0788 Ahg487366 sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors
21.5639 Ahg901754 ENTH/VHS/GAT family protein
22.1811 Ahg480532
22.7816 Ahg471269 S-locus lectin protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression