| Annotation |
|---|
| Description | jgi|Araly1|492708|fgenesh2_kg.7__2141__AT4G21670.1 |
| Sequence |
AGAACGCCAC AAAACCTAAT AAACTTTTCC CAGATACACA AACAAAATCA TCATCAAGGA AGAAGAACTA GGGGTTTTTT GTGGATTCAT CATCGGTATT TTACAGATCT ATATTCAAAG GGAACAAAAT CTAAAGAACA AACACTAAAT TCTCATTCTT TCTCTTATTA CCAAATCTTC TTTTGTTTTC TTGATTCTTG CTAAAGAAAA AACTCGGATC CAATTCAAAA ACTAGTGTGG ACTGGTGATC AATCTATCAA ATCAGGCCAA GGGACAAGAA AAAGTTAAGA TTTTGATGAA CCAATTTGAG ATGAGACATT AGACATCCAT TGATCTGTAA ACTTTAAGAA AAGAAAGTAT GTATAGTAAT AATAGAGTAG AAGTGTTTCA TGGAGATGGA AGAATTGGAG AAATGGAGAT ATACCCTTCA AGGGAATCGC AGCAGCAGCA AGAAGATGAT GTGATGAAGC AGAGGAAGAA GAAACAGAGG GAAGTAATGG AGGAAGCCAA GATGGGAATC AGAATAAGCC ACTTTTCTCA ATCTAGCGAG AGGTGTACTC CTCTCGCAGT ACTTACTACA ATTTCATCTT GTGGTCTCTG TTTCAAATTA GAAGCTTCAC CTTCTCTCGC TCAAGAGCCA CTCAGTCTTC TCTACTCGTC TTGTCTCATG GACAACAAGA CGGCAGTAAT GCTCCTGGGT GGAGAAGAGC TCCATTTGGT TGCCATGTAC TCGGAAAATA TCAAGAATGA CCGTCCTTGT TTCTGGGCAT TTAGTGTTGC CCCTGGAGTC TACGATTCCT GTCTTGTCAT GTTGCATATT AGATGTCTGG GTATTGTCTT TGATCTCGAT GAAACCCTTG TAGTGGCGAA TACCATGCGC TCATTTGAGG ATAAGATTGA CGGGTTGCAG CGGAGAATAA ACAATGAGAT GGACCCTCAA CGCCTTGCCG TTATGGTGGC TGAGATGAAG CGATATCAAG ATGACAAAAA TCTATTGAAG CAATATGTTG AAAGTGACCA GGTTGTTGAA AACGGGGAGG TGATCAAGGT GCAATCTGAA ATTGTTCCTG CCTTGTCTGA CAACCATCAG CCTCTTGTTC GCCCCCTGAT AAGGTTGCAA GAGAAGAATA TTATCCTGAC TCGCATTAAC CCGATGATTC GTGATACAAG TGTTCTTGTG AGAATGAGGC CTTCATGGGA GGAACTTCGA AGCTATTTGA CAGCAAAAGG GCGCAAGCGT TTTGAAGTAT ATGTTTGCAC GATGGCTGAA AGAGATTACG CCTTAGAGAT GTGGAGGCTC CTTGATCCAG AAGGGAATTT GATAAACACA AATGACTTGC TGGCTCGCAT TGTTTGTGTG AAATCTGGTT TAAAAAAATC ACTGTTCAAT GTGTTTCTCG ACGGAACCTG CCATCCAAAG ATGGCACTGG TAATTGATGA TCGACTGAAA GTTTGGGATG AGAAGGATCA GCCGAGGGTG CATGTGGTTC CTGCATTCGC TCCCTATTAT TCTCCTCAAG CTGAAGCTGC TGCAACACCA GTACTATGTG TTGCCAGAAA CGTTGCTTGT GGTGTCAGAG GTGGATTTTT CAGGGATTTT GATGATAGTC TGCTACCAAG GATTGCTGAA ATATCTTATG AGAATGATGT TGAGGATATT CCTTCTCCAC CTGATGTCAG CCATTATTTG GTGTCGGAGG ATGATACATC GGGTTTAAAC GGGAACAAAG ATCCACTTTC CTTTGACGGG ATGGCTGATG CTGAAGTGGA GAGAAGACTG AAGGAGGCAA TTTCTGCATC TTCAGTTGTC CTTCCGGCGG TAAATATAGA TCCAAGGATA GCTGCTCCCG TTCAGTACCC CATGGCTTCT ACTTCTTCTG TTTCAGTTCC AGTACCAGTA CCAGGACCAG TCGTGCAACA AGCACTACAA CCATCAGCTA TGGCCTTTCC AAGTTTTCAA CAACCGACAT CAATAGCAAA ACACTTGATT TCTTCAGAAC CAAGCTTGCA GAGTTCTCCT GCTAGAGAGG AAGGTGAGGT ACCTGAATCA GAATTAGATC CAGATACTAG GAGGAGGCTC CTCATATTGC AGCATGGACA AGATACTAGG GATCCTGCTC CAAGTGAACC TTCGTTTCCT CAGAGACCTC CAGTTCAAGC TCCAGCCCCA CATGTGCAAT CAAGAAATGG TTGGTTTCCT GTTGAGGAGG AGATGGATCC AGCTCAAATT CGTCGAGCAG TCTCCAAAGA ATATCCATTG GATTCTGAAA TGATTCATAT GGAAAAGCAC AGGCCTCGTC ATCCATCATT TTTTTCTAAG ATCGATAACT CAACTCAGTC TGACAGGATG CTTCATGAGA ATCGCAGGCA GCCGAAGGAG TCGCTCCGGA GAGATGAACA GTTACGGCCA AACAACAATC TACCTGGCTC TCATCCTTTC TATGGGGAGG ATGCGTCTTG GAATCAATCT TCTTCTAGGA ACAGTGATCT TGACTTCCTA CCTGAACGAA GTGTCTCAGC AACAGAGAGT TCAGCTGATG TTCTACATGG AATCGCTATC AAATGTGGAA CTAAGGTGGA GTACAGACCA AGTTTGGTTG CTAGTACAGA TTTGCGGTTC TCTGTTGAGG CTTGGCTTTC TAATGAAAAA ATTGGTGAAG GGATTGGCAA ATCGAGACGA GAAGCCCTGC ACAAGGCTGC TGAAGCTTCT ATACAGAACT TAGCTGATGT ATATATACAT GCAAATGGTG ACCCAGGGCC AAGCCACAGA GATGCTAGCC CCTTCACCAA TGGAAATATG ATTATGGGAA ACGCAAGTGC GCTTGATAAT CAGCCATTTG CCAGAGATGA AACAGCGATG CCAGTTTCTT CTAGACCTAC AGACCCGAGA TTGGAAGGTT CTATGAGGCA CACCGGCTCC ATTACTGCGC TCAGGGAATT GTGTGCATCG GAGGGTTTTG AGATGGCCTT TCAATCTCAG CGTCCGCTTC CATCTGACAT GGTCCACAGA GATGAATTAC GTGCTCAGGT TGAAATAGAT GGGCGTGTTG TAGGGGAAGG AGTTGGATCG ACATGGGACG AAGCTAGAAT GCAGGCTGCT GAGAGAGCAC TGTGTAGTGT GAGATCAATG CTTGGTCAAC CTGTGCATAA ACGACAAGGA TCTCCACGAT CATTTGCCGG GATGTCAAAC AAGCGTTTAA AGCCAGACTT TCAACGGTCT CTGCAACGGA TGCCATCTTC AGGAAGATAC TCTTAAAAAT AAAACCATGT GAAGAACAAA GCACATTCTT GATTCTACAT CAATTCCATT CTCTTGGTAA GAACAGCTAC CAAGACGAAT TCTTTGTCAA GTTCCTTTCT TCACCAAACG ATGATCAAGA CAGAGAGAGT TGGCTCTCTT GTATTGTTGT AACAACAGTT GAGGCGGATC ATGATTTTTG TATCATAAAA ACTCAAGAGT TGAAGCAACA GCCCGAGTGA TCACACAGAT AAGACCTAAG CATGAACGAT TAGCTTGTTC TCAGGGCTGT TAAGTTTCCA TAAAGCTTTA TTCTGCAGTT TTACAGTTCA CAGTCTCTGT TTTCACTTTT AGGTTATGAC TGATTCAAAG TTTATGAGAA AAGTGGAATC AACTTATCCT TTATTGAGAA ACAT |
| Length | 3654 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 8538981.. 8545515 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G21670.1 |
| Description | C-terminal domain phosphatase-like 1 |
| TAIR curator summary | encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. |
| Alias | [ATCPL1][CPL1][FRY2][SHI4][C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1][C-terminal domain phosphatase-like 1][FIERY 2][SHINY 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg919585 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 3 |
Ahg480549 | multimeric translocon complex in the outer envelope membrane 132 |
| 6 |
Ahg487419 | splicing factor-related |
| 8.3666 |
Ahg479521 | protein arginine methyltransferase 6 |
| 8.94427 |
Ahg474065 | actin 8 |
| 10.3923 |
Ahg491515 | pantothenate kinase 2 |
| 10.9545 |
Ahg482583 | translocase inner membrane subunit 44-2 |
| 13.7113 |
Ahg947182 | Protein kinase superfamily protein |
| 13.8564 |
Ahg496456 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| 16.2481 |
Ahg481833 | pumilio 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|