Detail



ID : Ahg493087

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493087|fgenesh2_kg.7__2520__AT4G17880.1
Sequence
AACAATCAAA CCAAACATCA ATATTTGCTT TAAAAACTTA CTTCTCTCCT CTGTCCTCAC CGGAAAAACA AAAAAAAAGT CTTCTCTTTT TTATGTCTCC GACGAATGTT CAATTAACCG ATTACCATCT CAACCAATCA ACCAACGGTA CAACAAATCT CTGGTCAACC GACGACGATG CATCGGTAAT GGAAGCTTTC ATCGGCGGCT CCGATCATTC TTCTCTTTTT CCTCCACTTC CTCCTCCTCC TCCACCTCCG GTCAACGAAG ATAATCTCCA GCAACGACTC CAAGCTTTAA TAGAAGGAGC AAACGAGAGC TGGACTTACG CTGTGTTCTG GCAATCATCT CACGATTTCG CCGGAGAAGA CGACGGAGTA AGAACCAACA ACAACAACAC AACCTTGTTA GGTTGGGGAG ATGGTTATTA CAAAGGAGAA GAAGAGAAAT CTAGAAAGAA GAAACCAAAT CCAGCTTCTG CAGCTGAACA AGAGCATCGT AAGAGAGTGA TACGAGAACT CAACTCTTTA ATCTCCGGTG GTGGTGGAGG AGGAGGAGAT GAAGCTGGAG ATGAAGAAGT TACAGATACT GAATGGTTCT TCTTAGTTTC AATGACACAG AGCTTTGTCA ATGGCACTGG TTTACCTGGT CAAGCTTTCT CGAACTCGAA CACGATTTGG CTTTCTGGGT CTAATGCTTT AGCTGGATCA AGTTGTGAGA GAGCTCGTCA AGGTCAGATT TATGGGTTAC AAACAATGGT GTGTGTAGCG ACTGAGAACG GTGTCGTTGA GCTTGGTTCG TCGGAGATTA TACATCAAAG TTCAGATCTT GTTGATAAAG TTGACACCTT TTTCAACGGT GGTGGTGAAT CTGGTTCTTG GGCGTTTAAT TTGAATCCAG ATCAAGGAGA GAATGATCCA GGTTTGTGGA TTAGTGAACC TAATAACACT GGTGTTGAAT CTGGTCTTGT AGCTGCTCCG TTGATGATGA ATAATGGTGG TAATGACTCA ACTTCTAATT CTGATTCTCA ACCAATTTCG AAGCTTTGTA ATGGAAGCTC TGTGGAAAAC CAAGTTTTGA AATCTGGTGA AATGGTGAGA GTTAAGAATG GGATTGAGAA TGGATTCTCT GGTCAAAGCC GGTTTATGGA AGAAGATAAG AGATCTCCGG TTTCGAACAA TGAAGAAGGG ATGCTTTCTT TTACCTCTGT TCTTCCACGG CCTGCGAAAT CCGGTGACTC GAATCACTCT GATCTTGAAG CTTCAGTGGC TAAAGAAGCT GAGAGTAATC GAATTGTGGT TGAACCGGAG AAGAAACCGA GGAAACGAGG GAGAAAACCG GCGAATGGAA GAGAAGAGCC TTTGAATCAT GTAGAGGCAG AGAGACAGAG AAGAGAGAAG TTGAATCAGA GATTTTACTC TTTGAGAGCT GTGGTTCCTA ATGTGTCTAA GATGGATAAA GCTTCTCTTT TAGGAGACGC GATTTCGTAT ATCAATGAGC TTAAGTCTAA GTTGCTAAAG GCTGAATCTG ATAAAGAAGA GCTGCAGAAG CAGATTGATG GGATGATCAA AGAGGCGGGG AATTCGAAAA GTTCGGTTAA AGATCGAAAA TGTTTGATTC AAGAATCGGG TGTGGTGATA GAGATGGAGG TTGATGTGAA GATTATTGGT TGGGATGCAA TGATAAGGAT TCAATGCAGT AAGAGAAATC ATCCTGGTGC TAAATTCATG GAAGCACTCA AGGAATTGGA TTTGGAAGTG AATCATGCGA GTTTATCGGT AGTGAATGAT CTTATGATCC AACAAGCGAC TGTGAAAATG GGGAATCAGT TTTTCACACA AGATCAGCTC AAGGTTGCTC TAATGGATAA AGTCGGAGAA TGTCCATGAC ACAAGTTTCT CTTGTGAATG TAGTTTGTAA ACTCTATTTG GGTAAGGGTA ATTTTGCAGT ACCCACTTGT TGCTATTGAA TGCTTGTTAG AGAGGATTCT TAGTGTAGTA TATGATTAGG TTGGGGTTTG TGGTTTCATG AATAAATGTG TTTGGTGTTG GTGTATGTAT GTAAATAAGG CTTTAATTTG TTAGAAATAA AACAAATGGG ACT 
Length2103
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10483409.. 10485646
Download Sequence
A.thaliana
AGI-codeAT4G17880.1
DescriptionBasic helix-loop-helix (bHLH) DNA-binding family protein
TAIR curator summary
Alias[MYC4]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg485660 KCBP-interacting protein kinase
10.247 Ahg490595 Patched family protein
12 Ahg476127 myb-like transcription factor family protein
13.5277 Ahg496800 indole-3-acetic acid inducible 9
20.0499 Ahg333107 Protein of unknown function (DUF1012)
30.1993 Ahg943542 Protein kinase superfamily protein
30.4138 Ahg942084
34.5254 Ahg493490 phytoene desaturase 3
35.242 Ahg928584 plastid transcriptionally active 13
37.55 Ahg480999 MATE efflux family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression