| Annotation |
|---|
| Description | jgi|Araly1|490595|fgenesh2_kg.7__28__AT4G38350.1 |
| Sequence |
ATGTATGACA TTTGTGGACA CCGCACCGAT GGAAAAGTCC TCAACTGTCC TTATGCTTCC CCTTCCATTA AGCCTGATGA CCTGTTTTCT GCCAAAATCC AAAGCCTTTG CCCAACCATA ACTGGCAAAG TCTGTTGTAC CGAGACTCAA TTTGACACTT TGAGGTCTCA AGTTCAACAG GCTGTCCCTT TTCTTGTCGG TTGTCCTGCA TGCTTACGAA ACTTCTTAAA CTTGTTCTGC GAGCTCTCCT GTTCTCCAAA TCAGTCTCTT TTCATCAACG TCACTTCTGT TGCTGAGGTG AGTGGAAATT TGACAGTGGA TGGTATAGAC TATCACATAA CTGATACTTT TGGAGAAGGC CTTTACGAGT CCTGTAAAGA GGTGAAATTT GGAACAATGA ACACACGTGC CATTAACTTT GTTGGCGGTG GTGCTCAAAA CTTCAGAGAA TGGTTTACGT TTATTGGTCA GAAAGCACCA CCTGGCTTTC CTGGTTCACC GTATGCGATA AACTTCAAAT CAAGCACCCC TGAGTCATCT GCGATGGTAC CAATGAACTT ATCTGTTTAT TCATGTGCTT GCTCAAGTCC CGAACCCCTG CCGCCCCATG AGGAAGATTC TTGCTCAATT AGAATCGGTC ATCTTAAGGT TAGATGCATT GAGTTATCAA TGGTACTTGT ATACATCTTG TTGGTGTCTT GCTTCTTCGG ATGGGCTGCT TTAAATCGAA GAAAAGATAT AACACAGCCT GGTGATAGCT CAGAGCCACT ATTGCATCCT GTGGAAGAAG ATGGAATTAA TAGTGAAACG AAGGAAAACA TACTTGGTGT CAAGGTGCAA AGACATGCTC AACTTTCTCC TGTTCAGAGA TATATGGCAA AATTTTACAG ATCATATGGG TCATGGATTG CTAGAAATCC ATCTCTTATT CTCTTCATGT CGGTGGCTAT TGTTCTTGCA CTCAGTTCAG GTCTCTATAA TTTCAAGGTG GAAACACGAC CAGAAAAGTT GTGGGTAGGT CCTGAAAGCA AAGCAGCAGA AGAGAAAAAG TTCTTTGATA CCCACCTTTC GCCGTTCTAC AGAATTGAGC AGCTTATCTT GGCCACTGTT CCTGATCCCA AAAGTGGCAG GGCGCCTAGT ATTGTAACAG ATGAAAATAT TCTTTTGCTT TTTGACATAC AACAAAAGGT TGATCAAATT CGCGGAAATT ATTCAGGTTC AGAGGTCTCT CTGCCCGACA TATGTTTGAA GCCTTTGGGA GAGGATTGCG CCACTCAGAG TATTCTGCAG TATTTCAAGA TGGACTCTGG AACTTTTGAT GATTATGGAG GAGTTGAGCA TGCTGAGTAC TGTTTCCAGC ATTACACTTC AGCAGAGATG TGTTTGAGTG CTTTTCAGGC GCCTGTTGAT CCTAGTGCAG TGTTGGGAGG ATTCTCGGGG AATAACTATT CAGAGGCTAC TGCGTTTGTT GTAACATATC CAGTTAACAA CGTCATTGGT GATTCAAGCA ACGAAAACGC AAGGGCAGTA GCATGGGAAA AATCGTTCAT TCAATTAGCA AAGGAGGAGC TGCTACCTAT GGTGCGATCC AAGAATTTGA GTCTGTCATT TTCATCCGAA AGCTCAATAG AGGAAGAGCT GAAAAGAGAA AGCACTGCTG ATGTTATAAC AATAGCTGCA AGCTATTTGG TTATGTTTGT TTACATTTCG GTCACACTTG GAGATGCGCC GCAGTTCTCT ACTTTTTACA TTTCATCAAA GGTTTTGCTC GGTCTTTCGG GGGTTGTGCT TGTCTTGCTT TCTGTACTTG GATCTGTTGG AGTTTTCAGT GCTCTTGGAG TTAAATCCAC ATTGATCATA ATGGAAGTCA TTCCTTTCCT AGTCCTGGCT GTGGGAGTAG ATAATATGTG CATACTGGTT CATGCTGTAA AGAGACAACC TCGTGATGTT TCTTTAGAGC AAAGAATTAG CTCTGCACTT GTTGAAGTAG GTCCATCCAT AACATTGGCA AGTTTATCCG AGGTCTTGGC TTTTGCTGTT GGAGCTTTTG TTCCAATGCC AGCATGTCGT ATTTTCTCCA TGTTTGCAGC TTTGGCTATT ATGCTGGACT TCTTTCTGCA AATCACCGCT TTTGTTGCGC TAATAGTTTT TGACTGCAAA AGATCTGCGG ATAACAGGAT TGATTGTTTC CCTTGCATAA AAGTTCCTTC ATCATCTCAA GAATCTGTTG AAGGTGGAAG AGGACCTGGG TTTCTTGAGA GATACATGAA GGAGGTTCAT GCACCCGTTC TTGGACTTTG GGTTGTAAAA ATGGTTGTTG TCGCTGTATT CTTGGCTTTT GCGCTGGCAA GCATTATATC AAGAGCGTCA CAGGCTCCAG ATACAAGTTA CATTGCCAAA CCAGCTGCTT CTTGGCTCGA TGACTTTCTT GTATGGCTAT CACCAGAGGC TTTTGGCTGT TGTCGGAAGT TCACTAATGG CAGTTATTGT CCTCCAGACG ACCAGTGCTT TCGACACTCA GATTTGGTTC AGGATCGTCC ATCTACAGCT CAATTCAGGG AGAAACTACC CTGGTTTCTA AATGCTTTGC CATCGGCTGA CTGTGCAAAA GGTGGTCACG GGGCTTATAC GAATAGCGTG GATTTAAAAG GGTATGAGAG TGGTGTTATA CAGGCATCTG AGTTCCGTAC ATACCACACT CCACTTAACA CACAAATTGA CATCTTTCCA TATTCTGTCT TCTACATTTT CTTTGAGCAA TATCTGAATA TCTGGACTGT AGCTTTGACG AACCTCGCTA TAGCAATCGG CATCCAACTC AATGCAGTTT CTGTTGTGAA TTTGATAATG TCAATCGGGA TTGCTGTAGA ATTCTGCGTG CACATATCAC ATGCTTTCCT GATGAGTAGT GGGAACAGAG AACAGAGAGC GACAGAGGCA CTGGAAACCA TGGGAGCTTC AGTTTTCAGT GGGATCACAC TCACAAAACT TGTTGGAGTG ATCGTGCTTT GCTTTGCAAG ATCTGAGATA TTTGTGGTGT ATTACTTCCA AATGTACTTG GCTTTGGTTA TAATCGGCTT CTTGCATGGG CTCGTTTTCT TACCTGTCAT ACTGAGTTTA GCTGGCCCGC CGCAGCTACA CTTGGACATC AAGCAGCAGC AGACAGACGA AGCTTCCTCT TCCCTATTGA ACTGA |
| Length | 3195 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 71845.. 80132 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G38350.2 |
| Description | Patched family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg950867 | U5 small nuclear ribonucleoprotein helicase |
| 7.93725 |
Ahg495190 | Protein of unknown function (DUF3414) |
| 10.247 |
Ahg493087 | Basic helix-loop-helix (bHLH) DNA-binding family protein |
| 10.7238 |
Ahg913525 | glutamate receptor 3.3 |
| 11.225 |
Ahg478314 | RAB GTPase homolog E1E |
| 13.4164 |
Ahg484011 | myb-like HTH transcriptional regulator family protein |
| 13.5647 |
Ahg481704 | ABC-2 type transporter family protein |
| 14.0712 |
Ahg487239 | HhH-GPD base excision DNA repair family protein |
| 17.088 |
Ahg919661 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
| 17.7482 |
Ahg490499 | BR-signaling kinase 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|