Detail



ID : Ahg493118

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493118|fgenesh2_kg.7__2551__AT4G17600.1
Sequence
AAGAAGAAAG CTTAACAATG GCGTTGTTCT CCCCGCCAAT CTCTTCTTCA TCTCTTCAAA ATCCCTATTT CATCCCCAAA TTCTCATTCT CTCTTCTCTC CACTAACCGC TTCTCTCTCC TCTCCGTCAC TCGAGCTTCC TCCGACAGTG GATCAACCTC TCCCACCTCC GCCACCGCCG TAGAGGCTCC TGAGCCTGTG GAGGTGATAA TTAAAGAAGC TCCGCAATCA ACACCGGCGG TTACAAAGGA AGAAATCACC ACCGCCAAAA ATGTCGCCGT TGAAGGTGAA GAGATGAAAA CGACGGAGAC GGTTATCAAA TTCCAGGATG CGAGATGGAT TAATGGAACT TGGGATCTGA AACAGTTCGA GAAAGATGGA AAAACCGATT GGGATTCTGT AATCGTTGCT GAGGCAAAGA GAAGAAAATG GCTAGAAGAG AATCCAGAAA CAACGAGTAA CGACGAACCA GTGCTTTTCG ATACATCGAT TATTCCATGG TGGGCTTGGA TTAAGAGATA CCACTTACCT GAAGCTGAAC TCTTAAATGG TCGTGCTGCG ATGATAGGAT TCTTTATGGC TTACTTTGTC GATAGTCTTA CCGGAGTAGG ACTTGTCGAT CAAATGGGGA ATTTCTTCTG CAAGACACTC TTGTTTGTGG CTGTGGCTGG AGTTTTGTTT ATCCGTAAGA ATGAGGATGT TGATAAACTC AAGAACTTGT TTGATGAGAC TACATTATAT GATAAGCAAT GGCAAGCAGC TTGGAAAAAT GATGATGATG AGTCATTGGG TTCTAAGAAG TGATAACAAA GATTTTCTTG CTTTCTTTGT TTTTGTTGTA ATTAGGAGAT GAACTTACCA AATGTAATAT GAAGAGATTT GAACAATGTT TCCTCAGATT ATCCTTGATC ATTTCTTTTA GCCATCTCTA CTTCACTTAA TCTAATTA 
Length948
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10646939.. 10648068
Download Sequence
A.thaliana
AGI-codeAT4G17600.1
DescriptionChlorophyll A-B binding family protein
TAIR curator summaryEncodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.
Alias[LIL3:1]
Gene coexpression
MR
MR Locus Description
14.1421 Ahg928878 Thioredoxin superfamily protein
16.3401 Ahg481771 Photosystem II reaction center PsbP family protein
17.1464 Ahg489681 ribosomal protein S1
22.1133 Ahg496993 ferredoxin-NADP(+)-oxidoreductase 1
26.7208 Ahg489121 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
32.9848 Ahg484431 glyceraldehyde 3-phosphate dehydrogenase A subunit
34.2053 Ahg475805 ribulose bisphosphate carboxylase small chain 1A
34.7275 Ahg490441 Ribosomal L5P family protein
36.7423 Ahg484888 ribosomal protein L9
42.9535 Ahg471025 chloroplast RNA binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression