Detail



ID : Ahg496993

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496993|fgenesh2_kg.8__2809__AT5G66190.1
Sequence
AATAACTTAT CCTGTGTAAC ACTTGGCCTC GCATTGCCCT TCACACAATC CACACACATC CAATCACAAC CTCATCATAT ATCTCCCGCT AACCTTTTTC TTCTTTTTTT TTTTTTTTTG ACTTTGATCG CCACCAGTTC TTCTGATCAA CCATGGCTGC TGCTATAAGT GCTGCAGTCT CTTTACCTTC CTCCAAGTCA TCCTCTCTCC CCACCAAAAC CTCCTCTGTA TCCCCTCAAA GGATTTTCCT CAAGAAGAGC ACACTGTGTT ACAGGAGAAG AGTTGTGTCA GTGAAGGCTC AGGTGACAAC AGATACTACC GAGGCACCAC CAGTTAAAGT AGTCAAGGAG TCTAAGAAAC AGGAAGAAGG GATTGTTGTC AACAAATTCA AACCTAAGAA CCCTTACACT GGTCGCTGCC TCTTGAACAC CAAGATCACC GGCGATGACG CTCCCGGTGA GACCTGGCAC ATTGTCTTCA CCACCCAAGG TGAGATTCCG TATAGAGAAG GGCAATCGAT CGGAGTGATT CCTGAGGGAA TTGACAAGAA CGGGAAGCCG CACAAGCTCA GGCTTTACTC TATCGCCAGT AGTGCCATTG GTGACTTTGG AGACTCCAAG ACCGTTTCTC TCTGTGTCAA GAGACTAGTT TACACAAATG ATAGCGGAGA GATTGTTAAG GGGGTCTGCT CCAACTTCTT GTGTGACTTG AGGCCGGGTG ATGAAGCTAA GATCACTGGA CCTGTTGGGA AGGAAATGCT TATGCCAAAA GACCCTAATG CCACCATCAT CATGCTTGGA ACAGGAACTG GAATAGCTCC ATTCAGATCA TTTTTGTGGA AAATGTTCTT CGAGGAACAC GAGGACTACA AGTTCAATGG TTTGGCCTGG CTCTTCTTGG GTGTACCCAC AAGCAGCTCT CTGCTATACA AGGAGGAGTT TGAGAAGATG AAGGAGAAGA ACCCAGACAA CTTCAGGCTG GACTTTGCGG TGAGCAGAGA ACAGACGAAC GACAAGGGAG AGAAAATGTA CATTCAGACA AGAATGGCAG AGTATGCAGA AGAGCTGTGG GAGTTGCTGA AGAAAGACAA CACCTTTGTT TACATGTGTG GTCTGAAGGG TATGGAGAAG GGTATCGATG ACATTATGGT CTCACTTGCT GCTAAAGATG GGATCGATTG GTTGGAGTAC AAGAAGCAAT TGAAGAGGAG TGAGCAGTGG AATGTTGAAG TCTACTAAGG AAGGCTTCTG AGGGAGTTAT TATATAATGT AGATAAAAAG CTGATGCATT GTGAAATCTT CATTTATGCT TCTTTCTTCT TTCTCAAGGA TTTTCCATCA AAACATTCAA AAGAGAGCAT CAATACCATC AAACTACTCT TTCTCACTTG TTGTTCATGT TATATTTCTT GCAACAATAT AGTGAGTTTT GTGATTTATG TTTTTC 
Length1446
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21469883.. 21471989
Download Sequence
A.thaliana
AGI-codeAT5G66190.1
Descriptionferredoxin-NADP(+)-oxidoreductase 1
TAIR curator summaryEncodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane.
Alias[ATLFNR1][FNR1][LEAF FNR 1][ferredoxin-NADP(+)-oxidoreductase 1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg490821 serine transhydroxymethyltransferase 1
3.16228 Ahg487785 peroxisomal NAD-malate dehydrogenase 2
3.16228 Ahg472228 ferredoxin-NADP(+)-oxidoreductase 2
3.31662 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
4 Ahg490231 photosynthetic electron transfer C
4.69042 Ahg943235 ATPase, F1 complex, gamma subunit protein
5.09902 Ahg477073 photosystem II subunit R
6 Ahg475922 hydroxypyruvate reductase
6.08276 Ahg495943 methyl esterase 18
6.245 Ahg478862 Aldolase-type TIM barrel family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression