Detail



ID : Ahg481771

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481771|fgenesh2_kg.4__831__AT2G28605.1
Sequence
GGAGAAGGAA GCAAAATGTG GTCGCAAAGC TTCTTAGCTT CTCTTCACTT CTCTGCTCCT CCCAAATTGT CTCTCTTCTC ACCATCATCA TCTTCTTCTT CTTGTTTTCA TCAGAAGATC CATAAACGTA TCCTCTGCTT TACCCAAAAT CCATCATCCA AAACTGAGAT CAATCTCAGC AAAAGACACT TAAATCTCTC AATTCTCACA CTCTTCTTCA ATGGGTTTTT CTTATTGGAT AAAGCCAAAT CCATCGAAGA ACTTCAAAGA TACACTGATT CCAACAATGG CTTCACTCTT CTCATACCCT CTTCTTATAC CAAGGTAGAG AAAGCTGGAG CCAATGCTCT GTTTGAAGAA CCAAACAATG GAAGCAACAA TATTGGTGTT GTGGTTAGTC CTGTCCGTAT AAAAAGTCTT GACCAATTTG GTACTCCTCA ATTTGTTGCT GATAAGCTCA TCAACGCAGA GAAACGAAAG GAAAGTACAA AGGAAGCAGA AGTTGTGTCA GTGGGAGAGA GACCAGGATT AGGACAACAA GTGTATGAGT TTGAATACAA AATTGATAGT ACGAGAGGAG GAATTAAGAG GGTTTTCTCA GCTGCGTTTG TGAGTTCTAA TAAGCTTTAT CTATTGAACG TTGTTCATTC AGATAAACCA GAGAATCCGT TAGATTCAAG TACGAGAATG TTGTTGGAAC AAGTTCTTCA CTCTTTTGAT GCTCTGCCTC TTACATGACC AACCCAATAA ACTGTTTTCT TGTTGAGCTT GTTTGATGGG CTTATTCTTG AGTTAATGGG CTTTGTAGTA AATTGTTGAG CCCAATAAAT CTGAGATTTC TTTTGTTACA AATAATGTTG CCTAGTTA 
Length868
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12230552.. 12231544
Download Sequence
A.thaliana
AGI-codeAT2G28605.1
DescriptionPhotosystem II reaction center PsbP family protein
TAIR curator summaryEncodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side).
Alias
Gene coexpression
MR
MR Locus Description
16.3401 Ahg493118 Chlorophyll A-B binding family protein
16.4317 Ahg922337 Single hybrid motif superfamily protein
17.5784 Ahg495287 Sugar isomerase (SIS) family protein
20.7846 Ahg910061 dual specificity kinase 1
26.7955 Ahg489681 ribosomal protein S1
28.6356 Ahg473903 Pentatricopeptide repeat (PPR) superfamily protein
38.5746 Ahg913547 polypyrimidine tract-binding protein 3
45.4753 Ahg490441 Ribosomal L5P family protein
45.7493 Ahg906998 Uncharacterized protein family (UPF0016)
50.0799 Ahg479081 AAA-type ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression