Detail



ID : Ahg493160

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493160|fgenesh2_kg.7__2593__AT4G17170.1
Sequence
TCGCTGGATT TGCTGGAAAA CAAACCGTCA TTTCTCCGTC TTTATAGAGA AAAAAAGATT CTCTTCTCGT CATCGTCTTA AAGGGATTCG TTTTTTTCTC GCCTGAACCT GCGGATTTTC TTTCGATTCT TCAAATTCAA TGTCTTATGC TTATCTCTTC AAGTATATCA TCATCGGCGA TACTGGAGTA GGGAAATCAT GTCTTCTGCT TCAGTTCACC GACAAGAGGT TTCAGCCGGT GCATGACCTT ACCATTGGTG TTGAATTTGG GGCTAGGATG ATCACCATCG ACAACAAACC TATCAAGCTT CAGATCTGGG ATACGGCTGG TCAAGAATCC TTTAGGTCTA TTACAAGGTC ATACTATAGA GGAGCTGCAG GGGCATTGCT TGTCTATGAT ATCACAAGGA GGGAGACATT TAACCATCTA GCTAGCTGGC TAGAAGATGC AAGGCAGCAT GCAAATGCAA ATATGACGAT AATGCTCATT GGGAATAAGT GTGATCTTGC TCACAGAAGG GCTGTGAGCA CAGAGGAAGG AGAGCAGTTT GCAAAGGAGC ACGGTCTTAT ATTCATGGAG GCCTCTGCCA AGACTGCTCA GAATGTTGAG GAGGCATTCA TTAAGACAGC CGCAACAATA TACAAGAAGA TTCAAGATGG TGTGTTTGAT GTGTCAAATG AGTCATATGG AATAAAAGTT GGATATGGAG GAATTCCAGG ACCATCAGGT GGAAGAGATG GATCTACCTC CCAAGGAGGA GGGTGCTGCG GCTGAGATGG GAAATATGTC TATATCATCA TGTAAAAATG ATCACATATG ATATAGCAAA AATGTCTCTG CTTCTTTTCT ATAGTTGTAA ATCGTTTTGG AATTCGATTT GGTGACTGTG TTGTGATGGG TTTTGGAACG GTTTGACAAT ACACGTGTAT GTCTATTCAT ATATCTAAAA 
Length950
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10867531.. 10869330
Download Sequence
A.thaliana
AGI-codeAT4G17170.1
DescriptionRAB GTPase homolog B1C
TAIR curator summarymember of RAB gene family
Alias[AT-RAB2][ATRAB-B1B][ATRAB2A][ATRABB1C][RAB-B1B][RAB2A][RABB1C][ARABIDOPSIS RAB GTPASE HOMOLOG B1B][RAB GTPASE HOMOLOG B1B][RAB GTPase homolog B1C]
Gene coexpression
MR
MR Locus Description
9.27362 Ahg488117 RNA helicase family protein
14.3527 Ahg474695 isocitrate dehydrogenase
27.9643 Ahg484456 auxin signaling F-box 2
30.692 Ahg491509 Protein kinase superfamily protein
36 Ahg905276 with no lysine (K) kinase 2
36.3318 Ahg484697 RING/U-box superfamily protein
42.4971 Ahg491382 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
43.2666 Ahg484581 DegP protease 1
45.8258 Ahg482617 Family of unknown function (DUF662)
48.5798 Ahg484750 Methylenetetrahydrofolate reductase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression