| Annotation |
|---|
| Description | jgi|Araly1|493409|fgenesh2_kg.7__2842__AT4G14850.1 |
| Sequence |
GAAATTACCA TTATGCCATT CAATGTTTCT TCAAAGCTAT GACCTTTCCG ATCTCCGGCG TTAGTTATGA CGCTCCTAAC CGCGGACGCA CTTGGGTTAC TTCTCAAGAA TGCAATCTCC ACGAGCTCCA TGCGTTTGGG TCGCGTCGTT CACGCAAGAA TCGTCAAAAC CCTCGATTCA CCACCACCTC CGTTTCTCGC AAACTATCTC ATCAATATGT ACTCAAAACT CGACCATCCT GAATCAGCCC GACTCGTTCT CCGACTCACT CCTGCGCGAA ACGTCGTCTC TTGGACCTCA CTTGTCTCCG GACTTGCTCA GAACGGTCAT TTCTCCACCG CTTTGTTTGA ATTCTTTGAA ATGCGACGAG AAGGTGTTGC CCCAAATGAC TTCACTTTCC CTTGTGCTTT TAAAGCTGTG GCTTCTCTGC GTTTACCTGT TACTGGGAAG CAGATTCATG CGCTTGCTGT GAAATGTGGA AGAATACTTG ATGTGTTTGT TGGGTGTAGT GCTTTTGATA TGTATTGTAA GACTAGGCTT AGGGATGATG CACGGAAGTT GTTCGATGAA ATTCCTGAGA GGAACCTTGA AACTTGGAAT GCTTATATAT CTAACTCTGT GACTGATGGA AGGCCAAAGG AAGCTATTGA AGCGTTTATT GAGTTTAGAA GGATTGGTGG GCTACCGAAT TCGATAACTT TTTGTGGTTT TCTTAATGCT TGTTCGGATG GGTTACTTTT GGATTTAGGA ATGCAAATGC ATGGGCTTGT GTTCCGAAGT GGGTTTGATA CAGACGTTTC AGTGTACAAT GGGTTGATCG ATTTCTATGG AAAGTGTAAG CAGATTCGTA GCAGTGAGAT TATCTTCGCT GAAATGGGAA TAAAAAATGC TGTTTCTTGG TGTTCATTGG TTGCTGCATA TGTGCAGAAT CATGAGGATG AGAAGGCGTC TGTATTATAT CTACGTTCAA GGAAGGAAAT TGTTGAGACC TCTGATTTTA TGATTTCAAG TGTTCTGAGT GCGTGTGCTG GTATGGCAGG TCTTGAGTTA GGAAGATCGA TACATGCTCA CGCTGTGAAG GCGTGTGTTG AAAGGAATAT TTTTGTTGGA AGTGCCCTCG TTGACATGTA TGGAAAATGC GGATGCATAG AAGATTCAGA ACAAGCGTTT GATGAGATGC CTGAAAAGAA CTTAGTAACT CTGAATTCAT TGATCGGAGG ATATGCTCAT CAGGGTCAGG TTGACATGGC ATTGGCGTTA TTTGAAGACA TGGCACCACG TGGATGCGGT CCGGCTCCAA ACTATATGAC GTATGTGTCC TTGCTTTCCG CTTGTAGTAG AGCAGGGGCT GTGGAAAATG GTATGAAAAT ATTTGATTCG ATGAAGAGTA CTTATGGCAT TGAGCCAGGG GCTGAGCATT ATTCCTGCAT CGTGGACATG CTAGGGCGAG CAGGAATGGT AGAACAGGCT TTTGAATTCA TTAAAAAAAT GCCAATTAAA CCGACAATTT CGGTTTGGGG TGCTCTTCAG AATGCTTGTA GGATGCATGG TAAGCCACAC CTCGGAATAC TAGCAGCTGA GAACCTTTTC AAACTTGACC CTAAAGATTC AGGCAACCAC GTTCTGCTTT CGAATACGTT TGCAGCGGCT GGGAGGTGGG CGGAAGCCAA CACCGTAAGA GAGGAGATGA AAGGCGTAGG AATCAAGAAA GGAGCCGGGT ACAGTTGGAT CACAGTGAAG AACCAAGTCC ATGCCTTCCA AGCGAAGGAC AGATCCCACA AAATGAACAA AGAGATTCAG ACAATGCTGA CCAAGCTAAG GAACAAAATG GGGGCTGCAG GGTACATGCC CGACCTGAAA CTCTCCCTTT ACGATCTGGA AGAAGAAGAA AAAGCAGCAG AAGTCTCGCA CCACAGCGAA AAACTAGCTC TAGCATTTGG CTTGGTGGCT TTACCACTCG GTGTCCCAAT CAGAATCACC AAGAACCTTA GAATCTGTGG AGATTGCCAC AGCTTCTTCA AGTTTGTCTC AGGGAGTGTT AAAAGAGAGA TCATTGTGAG AGACAATAAC CGGTTTCATC GGTTTAAAGA TGGGATATGT TCTTGTAAGG ATTATTGGTA ATCTTTATTA GTTTAGTTTG TTAAACATTT T |
| Length | 2151 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 12657672.. 12660130 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G14850.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase. |
| Alias | [LOI1][MEF11][lovastatin insensitive 1][mitochondrial RNA editing factor 11] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 26.6646 |
Ahg904413 | phosphoesterase |
| 26.8328 |
Ahg482032 | elongation factor family protein |
| 27.2764 |
Ahg477810 | Signal peptidase subunit |
| 36.7423 |
Ahg486720 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| 40.7308 |
Ahg496142 | nuclear RNA polymerase C1 |
| 41.328 |
Ahg482441 | maternal effect embryo arrest 22 |
| 54.4794 |
Ahg472147 | |
| 55.3895 |
Ahg486162 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 55.6776 |
Ahg474658 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 58.0345 |
Ahg495739 | TCP-1/cpn60 chaperonin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|