Detail



ID : Ahg493557

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493557|fgenesh2_kg.7__2990__AT4G13520.1
Sequence
AACATTTTAG ATCTTTCCCG AAGAAGACGA ACAAGAAGAA GAGAGAAATG AGGCCGATGC AGCTGGATAT GTTGTCGGAG ATGGATGATG CAGGTTCTTC AATGGCCATG GACGTTGATG ACCTCGAAGC CATGGAGATT CTCAACGAAG GAGGACTTGT TTCAGATAAC AAGCTCGCCG ACGCCGATTT CTTCAACAAA TTCGAGGATG ATTTCGACGA CACCGATATC AACTAAATCC GGTTAATTTC TTCTTTAAGA TTTCAGTTTT TGTCCTAATC TTTATTTAAT TTGTGGAGAA ACCTATGTAA TGTGTGTAAG TCCTGGGATT TTAATGTTTG TGTTATGTAA CAACGATTTC ATGTTTTTGG ATCACTAAAA CATTTGATTT GAGTGTTATT TTGCTTTGGT ATTGATTTGA TTTGTTTTTG CACAAATTTA GAATGTTTTT TTTTTGGAGA TTGAAACCTA ATTT 
Length474
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13982099.. 13982614
Download Sequence
A.thaliana
AGI-codeAT4G13520.1
Descriptionsmall acidic protein 1
TAIR curator summaryEncodes a small acid protein (SMAP1) that mediates responses Arabidopsis root to the synthetic auxin 2,4-Dichlorophenoxyacetic acid.
Alias[SMAP1][small acidic protein 1]
Gene coexpression
MR
MR Locus Description
10.6771 Ahg942960 VIRB2-interacting protein 2
12.6491 Ahg487758 Tetratricopeptide repeat (TPR)-like superfamily protein
13.5647 Ahg495412 HSP20-like chaperones superfamily protein
15.4919 Ahg334100 lactoylglutathione lyase family protein / glyoxalase I family protein
17.6635 Ahg474346 protein kinase family protein / C-type lectin domain-containing protein
20.3224 Ahg488189 alpha-N-acetylglucosaminidase family / NAGLU family
29.4788 Ahg929959 PYRIMIDINE B
32.8634 Ahg311691 glyoxalase 2-4
37.47 Ahg471136 SKP1-like 18
37.6829 Ahg487803 actin 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression