Detail



ID : Ahg471353

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471353|fgenesh2_kg.1__1307__AT1G12050.1
Sequence
AGTCATCATC TCAAAAACGG CATCTTAAGA AAAAAAATCT ATACCTACCA CTTCGAACTA ACTCTTCTCT ATCGCAACTA GAAATTGGGG ATTAGCTTGG GAAACTTCGC CGGAGATTCA TACGTCGTCG TCGTCCATGG CGTTGCTGAA GTCCTTTATC GATGTTGGCT CAGACTCACA CTTCCCTATC CAGAATCTCC CTTATGGCGT CTTCAAACCG GAATCGAACT CAACTCCTCG TCCTGCCGTC GCTATCGGCG ATTTGGTTCT GGACCTCTCC GCTATCTCCG AAGCTGGGCT TTTCGATGGT CCGATCCTTA AGGACGCCGA TTGTTTCCTT CAGCCTAATT TGAATAAGTT CTTGGCTATG GGACGGCCTG CATGGAAGGA AGCGCGTTCT ACGCTTCAAA GAATCTTGTC ATCTAATGAA CCTATCTTGC GCGACAATGA TGTTTTGAGG AAAAAGTCAT TCTATGAGAT GAGTAAAGTG GAAATGATTG TTCCTATGGT GATTGGGGAC TATACAGACT TCTTTGCATC TATGCATCAC GCGAAGAACT GCGGGCTTAT GTTTCGTGGG CCTGAGAATG CGATAAACCC AAATTGGTTT CGTCTTCCCA TTGCATATCA TGGACGGGCA TCATCTATTG TCATCTCTGG GACCGACATT ATTCGACCAA GAGGTCAGGG CCATCCGCAA GGAAACTCTG AACCATATTT TGGTCCTTCG AAGAAACTTG ATTTTGAGCT TGAGATGGCT GCTGTGGTTG GTCCAGGAAA TGAATTGGGA AAGCCTATTG ACGTGAATAA TGCAGCCGAT CATATATTTG GTCTAGTACT GATGAATGAC TGGAGTGCTA GGGATATTCA GGCGTGGGAG TATGTACCTC TTGGTCCTTT CCTGGGGAAG AGTTTTGGGA CTACGGTATC CCCTTGGATT GTTACCTTGG ATGCGCTTGA GCCTTTCGGT TGTCAAGCTC CCAAGCAGGA TCCACCTCCA TTGCCATATT TGGCTGAGAA AGAATCTGTA AATTACGATA TCTCCTTGGA GGTTCAACTT AAACCTTCTG GCAAAGATGA TTCTTGTGTA ATAACAAAGA GCAACTTCCA AAACTTATAT TGGACCATAA CGCAGCAGCT AGCACACCAT ACCGTTAACG GTTGCAATTT GAGGCCTGGC GATCTCCTTG GCACCGGAAC CATAAGCGGA CCGGAGCCAG ATTCATATGG GTGCCTACTT GAGTTGACTT GGAATGGACA GAAACCTCTA TCACTCAGCG GAACAACTCA GACGTTTCTC CAGGACGGAG ACCAAGTCAC CTTGTCAGGT GTATGCAAGG GAGATGGTTA CAATGTCGGG TTTGGAACAT GCACAGGGAA AATTGTTCCT TCACCGCCTT GATCAGCTCT CGCCGGTAAC GTACCTTTAT CAGAGATTTC TATAATCACG ATTATATGGA TATGATTAAG TAGATAACCC CATCTCGATA TTGGCGTAAT ATGTTATTGA ATCTTTTATA AAGAAAGACA ACGGAATATT AATAACTTTC AATATGAAA 
Length1559
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4628945.. 4632148
Download Sequence
A.thaliana
AGI-codeAT1G12050.1
Descriptionfumarylacetoacetase, putative
TAIR curator summary
Alias[AtFAH][FAH][SSCD1][fumarylacetoacetate hydrolase][short-day sensitive cell deathshort-day sensitive cell deathshort-day sensitive cell death 111]
Gene coexpression
MR
MR Locus Description
2 Ahg470455 potassium channel beta subunit 1
4.58258 Ahg481139 peroxisomal NAD-malate dehydrogenase 1
4.69042 Ahg921434 F-box family protein
6.63325 Ahg470730 Thioredoxin superfamily protein
6.9282 Ahg486488 DYNAMIN-like 1E
6.9282 Ahg487407 NAD(P)-binding Rossmann-fold superfamily protein
8.24621 Ahg493763 pfkB-like carbohydrate kinase family protein
10.583 Ahg926777 Phosphoribulokinase / Uridine kinase family
11.6189 Ahg919087 multidrug resistance-associated protein 5
12.3288 Ahg488204 pheophytinase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression