Detail



ID : Ahg493797

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493797|fgenesh2_kg.7__3230__AT5G41870.1
Sequence
AATTCTCCGG CGAGAAATTT CCACTGAGAT TTTACTCTCT CTCTATCTTC TTCAATCTCC GATATGACGC TTTCTCGAGC TCCGATCTCT GTTTTCGTAC TCTTCTTGCT CTCCACTGTT TTGCCTCACC ATCTCTCGCT CGGAGCTCCG ATTACATGCT CTGGTATAGT TCCGATGAAA CACAGGACCG AGATGCTATC GATTTTTGAT TTTGGAGCTG TCGGTGACGG AAAGACCTTA AACACCAACG CATTCAATAC AGCGATTGAT CGGATACGAA ACTCCAACAA CAGTAGCCAA GGAACGCTTC TTCATGTGCC TCGTGGTGTC TATTTGACTC ATAGCTTCAA TCTTACTAGT CATATGACTC TTTACCTCGC CGATGGTGCG GTTATTAAAG CCGTTCAGGA TACGGAGAAA TGGCCTTTGA CCGATCCTTT GCCGTCTTAT GGAAGAGGAC GGGAGCGCCC TGGACGAAGA TATATCAGCT TTATTCATGG AGATGGACTC AATGACGTTG TTATTACAGG CAGAAATGGG ACGATTGATG GCCAAGGAGA ACCTTGGTGG AACATGTGGA GACATGGAAC TCTAAAGTTT ACTAGACCGG GTCTCATCGA ATTCAAGAAC TCAACAAACA TCGTCGTCTC TCACGTTGTT CTTCAGAACT CCGCTTTCTG GACACTTCAT CCTGTTTATT GCAGTGATGT TGTGGTTCAT CACGTTACCA TTCTCGCTCC AACTGATTCC TTCAACACCG ATGGAATTGA TCCAGATTCA AGCTCTAACG TCTGTATAGA AGATTCCTAC ATATCTACTG GTGATGACCT TGTTGCGGTA AAAAGCGGTT GGGATGAGTA TGGCATTGCC TACAACCGTC CAAGCCGTGA CATCACCATC CGCCGCATCA CTGGATCTTC CCCTTTTGCT GGAATAGCCA TCGGAAGCGA AACCTCTGGC GGAATCCAAA ATGTAACAGT TGAAAACATC ACTCTATACA ATTCTGGTAT CGGCATCCAC ATCAAGACAA ACATTGGCCG AGGAGGAAGC ATCCAAGGGA TAACAATCTC CGGGGTTTAC CTGGAAAAAG TCCGGACCGG GATTAAGATC TCTGGCGACA CCGGAGATCA CCCAGACGAT AAATTCAACA CATCCGCTCT TCCCATAGTA AGAGGCATAA CGATCAAGAA CGTATGGGGA ATCAAAGTCG AGCGTGCTGG TATGGTTCAG GGATTAAAAG ATTCACCTTT CACTAATCTC TGCTTCTCCA ATGTTACACT CACCGGAACA AAAAGTACTC CAATATGGAA ATGCTCAGAT GTCGTAGGCG CCGCCTCCAA GGTCAACCCC ACGCCTTGCC CTGAGCTAAC CACAACCACA CAACAAGGCG GTTCCTGCGA AAACCAATCC TAATACTCCA AAGATAAGAG ACTACATGTA GATTAACGTA AGTT 
Length1454
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20034057.. 20035858
Download Sequence
A.thaliana
AGI-codeAT5G41870.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.09902 Ahg940990 Protein kinase superfamily protein
6.48074 Ahg470975 nuclear factor Y, subunit C9
8.48528 Ahg475653 LETM1-like protein
9.69536 Ahg919332 Rho termination factor
10 Ahg923642 Pyridoxamine 5'-phosphate oxidase family protein
10.247 Ahg474773 alpha/beta-Hydrolases superfamily protein
10.7238 Ahg490285
12.9615 Ahg478135 Calcium-dependent ARF-type GTPase activating protein family
14.0712 Ahg942565 F-BOX WITH WD-40 2
18.4391 Ahg495767 serine acetyltransferase 1;1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression