Detail



ID : Ahg942565

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942565|scaffold_603109.1
Sequence
TTTCTTGTAT TGGTTTGTAG ATGGAAGAAG ATTGCGAGTT TCGACATTGG GATGAGTTAA TTCCAGACGC TCTTGGTTTA ATCTTTAGTC ATTTAGCTCT TCAAGAGGTA CTAACAGTGG TGCCTAGAGT TTGCAAAGCA TGGAACAGAG CTGTTACTGG ACCTTATTGT TGGCAAGAGA TTGACATTGA GCTGTGGAGT AACCGTTGTC ATCAGTCTGA TCATCTTGAC CGGATGCTTG AAATGTTGAT CCCTAGGAGC TCTGGTTCGT TGCGAAAACT CTCCGTTACT GGCCTTCGAA ATGACTCTAT CTTCTCCTTC ATTGCACAAC ATGCTGGTTC ACTTAAAACC TTGAAGGTGC CAAGAAGTGG TCTGACTAAT TCGGGTGTGG TAAACGTAGC TGAAAAGCTT TCGTCTCTCA CTTTCTTGGA CTTGAGCTAC TGCTGCAAAG TAGGTCCAGA GGCGATACAA GCCATAGGAA ACCATTGTAA ATCCCTGAGA GAGTTTTGCA GAAACATGCA TCCATTGGAT GTAGCAAGTG TTGTCTCTCA CGACGATGAA GCTTATGCAA TTGCCAACAC AATGCCAAAG CTGAAGCGGT TAGAAATTGC ATATCACCGA GTCAGCACAG AAGGAGTACT CAAAATCTTA TCGTGCTGCG TTTTTCTTGA GTTCTTGGAA CTTAGAGGCT GTTGGGACGT GCAACTCGAT AACAAGTTCT TCAAAGAAAA GTTTCCTGAT ATGAAAGTGT TAGGTCCACG CGTGATCGGA TTCTATGATA TGATAAACGA TTGGGAGGAT TGCTGCTCAG ATTATTTCTC AGATGGGTCT GATTACCTGG CCTGGGAGTT TTTTGAAGAT GGTGTAATGG GAGAGTTCTA TGAAGATGAG TTTGAGCATG GTTGGGATGA TAATTTTTAT GCGGACAACG CAATTTTAGA CATGGAACCG CATGTTTGGC CGCCATCTCC ATGAACCAGG TCTTGTTATG TTCGAAGTCT CTACCTAAAG TTGCTACTAG GAATGGTTTT AGCCTCTTAT GTGTCTTGAT CTATGTATGG TGCTTGAACT TGTGTGGCTT CTTTGTGTTA TTCTAATATA AAAGGCTT 
Length1108
Protein Sequence
Protein Residue
Map Locationscaffold_6: 16856914.. 16858398
Download Sequence
A.thaliana
AGI-codeAT4G08980.1
DescriptionF-BOX WITH WD-40 2
TAIR curator summaryEncodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.
Alias[FBW2][F-BOX WITH WD-40 2]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg927786 Plant protein of unknown function (DUF827)
3.4641 Ahg479664 DNA binding
4.24264 Ahg940448 nuclear matrix protein-related
4.69042 Ahg350108
8.12404 Ahg891152 aconitase 3
14.0712 Ahg493797 Pectin lyase-like superfamily protein
14.4568 Ahg489687 zinc finger (C2H2 type) family protein
15.1987 Ahg943758 Nucleotidyltransferase family protein
17.2047 Ahg491024 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases
17.3205 Ahg489223
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression