Detail



ID : Ahg493857

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493857|fgenesh2_kg.7__3290__AT5G41190.1
Sequence
TTGAAGCGGC AAATAACGAG AACCATGGAT CCGAAACCAA CCTCAATGTG GAGTTCTATT GTGAAGAAAG ATCCACCTTC AAAGCCTCCG GTTAACGATG GAGCTCCGGC AGCGATTCTC GGTATGGTCG GAAACTGCAA ATCCACAAAG GGAATATCTA TGGCTGTTGT TGACGCCAAC GCCGTCATCG AAGGAGGCCA GAGCTTAACA AACTTCGCCG ACAGATTCGT AACCGTCCCT GAAGTACTCT CTGAGATTCG TGACCCTGCT TCTCGCCGTC GTCTCGCTTT CATCCCTTTC ACTATTGATA CCATGGAACC TTCTCCTGAA TCTCTCAGTA AAGTTATCAA ATTTGCAAGA GCTACTGGTG ATTTGCAGAC TCTGTCTGAT GTTGATCTCA AATTGATTGC TTTGTCATAC ACGCTTGAGG CTCAGGTTCA TGGCACCAAA AATCTTAGAG ATGTTCCTCC ACCGATTCAA ACTGTTAGAG TAAAGAGGTT ACCTGAGAAG GATTTACCTG GTTGGGGCTC CAATGTGTCT AACTTGGACG AGTGGGAGGC ACTTGAAAAC GAGACTGAGG AACTATCCAA CGCTAACTCC AAAATCCTTC CGTTGAAAGA CCTTAACATG AATATTATCG CTTCGGACAA TGTTTCTGAG GTTGGTTCTG TTGTCTCTCA TACTGAGAAT CATGAAGTGG ATGAGCAGGA AGGTGAGAAG AAGCATAGGC GATACCCGCC CAAGAAAACA GAGATTAAGC TTGAGGGTAA GATGGTAGTG AAGGGAATAG ATGCATCCCA GGGGCAATAT GATGATGATG ATGATGATGC CAGTGATTGG AGACCCGCAG TTAGTAGAAG TACTCACAGA AGGTTTCTTA GAAGGAAGGC AACGTGGGAA CATCACAATG CCTTGGCTGA ACAAGAAATT CAGCAAGATC AAGAAGCTGA CAAAGCTCGA CACTCTAAAG ACCCCAATGA AAACCATGCA AAAGATAGCG GAAAGGATGG TGAGGATCTA TCGTCCATCC TAAAAGATAT GAGGTTGGAG GAAGATTCAT TAAGGGCTCT CCACGAAGGG ACTGAAGAGA CGAATGCTGA AGCTACTTTG ATCAATGGTG ATGATGATAT TGAAGTCGAA GCTGAGGGGA TCGATGTTAC AAATCAAGCG CTAGAGAACT TGGAGATTGA TAGTGAGGCT GGGGATACCT TTGAGGCATC ATCGATTGCA GATGATGGTA GCAGCGAGCA GAGTTGGTCG TTGAGAGCCT TATCTGAGTC CAGTGTAGCT TGTATAACTG GTGATTATGC AATGCAGAAT GTTATTCTTC AAATGGGTTT GCGTTTGCTT GCACCCGGCG GAATGCAAAT TCGCCAACTG CACAGGTGGA TCTTGAAATG CCATGCTTGC TACACAGTAA CTCCTGAAAT TGGAAGAATC TTCTGTCCCA AGTGCGGTAA TGGTGGCACT CTACGCAAGG TAGCGGTTAC AATAGGCGAG AATGGCGCCA TCATAGCTGC ATGTAAACCA CGAATTATAC TTCGAGGGAC CCAATATTCG ATACCAATGC CTAAAGGAGG AAGAGAGGCA ATCACCAAGA ATCTGATTCT ACGGGAAGAT CAACTCCCTC AAAAGTTTCT CCACCCTAGG ACCAAAAAGA AAGCAAGCAA ACCGGGTGAT GAGTACTTTG TATCAGACGA TGTGTTCTTG AACCATCATA GTGATAGAAA GGCACCATTG CAGCCTCCTG TGAGAAAAGC TATGTCGGTT TTCAGCCAGA AAAGAAACCC TAATGACAAC CATTACTCTC GTTCTATGCA CTGATCTTTG TTTCTCCAAC ACAACAATCA TCTCCTTTAC TTTAAGAAGA TGCCAATGAT TTTGTCTCTT CTTTTTACTT TTTCTTTTTA AGTCCAAAAC TATTTTGAAA AGGTGAGAG 
Length1939
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20407847.. 20410399
Download Sequence
A.thaliana
AGI-codeAT5G41190.1
Description
TAIR curator summary
Alias[AtNOB1][NOB1]
Gene coexpression
MR
MR Locus Description
8.42615 Ahg493170 FRIGIDA interacting protein 2
9.27362 Ahg353746 Initiation factor eIF-4 gamma, MA3
14.0712 Ahg488158 no exine formation 1
16.0624 Ahg325922 pescadillo-related
19.2354 Ahg900473 zinc finger (CCCH-type) family protein
20.5426 Ahg918980 Acyl-CoA N-acyltransferases (NAT) superfamily protein
20.9284 Ahg949673 DEAD-box protein abstrakt, putative
23.6432 Ahg929940 ARM repeat superfamily protein
24.8193 Ahg476449 Eukaryotic translation initiation factor eIF2A family protein
25.3772 Ahg471898 KU70 homolog
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression