Detail


ID : Ahg493170

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493170|fgenesh2_kg.7__2603__AT4G17060.1
Sequence
GCGCGTATTC GGCGGCGGTG GAGAAGGTTT CGTCGGGTGC GCACACGTCA CCCACTCCGC GGCGCACTTT AGCACAACTC TCAACCGGCC ACCTCCTTCT CGGCCCAATC CTTCTTTAAC CTAACTTTTT TTTTCTAACG TGCGCCTCTC CTCTCCTCCG CCTCTTTATT ATCTCTTACC CACCGCTCTT TCTACTTTCA CTAATTTATT CTTCGCCGCC GCAATGTCAA TCCCCGATGA TGGATCTCCC GTCGCCATGG CCATCGATTC TTCCACCGCC GTAACCGTCG CCACCACCAC TACTAGAAGA GTTCCTCCTC CGTGCTGGAC CGACGAAGAA ACCGCTGCGC TTGTCAATGC CTACAAGGAT AAATGGTTCG CCCTCCGCCG TGGGAACCTC CGTGCGGCTG ATTGGGACGA CGTCGCCGCG GCTGTTTCGT CCTCGTCCAC CTTGGGAGGT CCGCCGAAAT CAGCAATCCA ATGTCGACAC AAGATCGAGA AGCTACGGAA ACGTTATCGC GGCGAAAAAC AACGGTCTCT TAATCGACCA GGCAAGTTCT CTTCCTCTTG GGATTTGTTC CCAATCTTGG ATGCTATGGG ATTCGCTCCG GTGACTCCGG CAGCCGTAGA AACTTACGAT CCCGATGTGG ATCATGATGA TGAGAGTAAC GGTTTGGATG GATTTAGGGT TAGATCGAAG AGGTCTGGGA AGTTTAGCGG TGGTTACTCT GATTCACCTC GAGATGTAGG AGATGGATAT GGGGTTAGAT CTAGGGCAAG GAGTAACATG AAATTGTATG GTGGTTTCAA GTCTGAGTTT GAATCAGATC ACGATTCAGG AAGTGGATTT GGATTGAAAA GGAAATACAA TGGGAATCCA AAGGTTAGTG CTGACTTCGA TGCTGATTCT GATGATGAGA TTGTGTTAGT CCCCAAGGCA ACTAGGCTTA GGGGTCATGG CAAGCCTTCC TCTGGCGAAT TTAGCCATGG CGGTGGTGGT GGTTTTCCGT TGAAGTCGTT TGGTGATCGA AATTTCGCTT CTCATGGATT TAAACCCAAG AATTTCAGTA AGCCTGAACC CAATTTCTCT CAGGATCTGG ATTATGATGA TGAGTTTGAT GATGATAGAG CAGAGAGGGA AGGATTCAAC CCGAGGATTC AAAGTTCTAG AAGCTCTTCG CGGGTGAATG GCTACAGCAG GAAGGATGGG AGCTATCCTC GAAACACTGG TGTTTCCAAT GGCTATGGAT CGTCTTCTAG GTTCAAGCAG GAGCAAATGA ATGCAGCAGC AGAAGTTGAG TCTGACCCGA TTGATGAAGT TGTCTCTTCT GTTAAGATGT TGACAGAAAT GTTTGTGAGG GTGGAGAATT CGAAGATGGA GATGATGAGA GAGATGGAGA AGTCGAGAAT GGAGATGGAG CTGAAGCATT GCCAGATGAT GCTTGAGTCG CAGCAGCAGA TCATAGGCGC GTTTGCTGAA GCATTGAGCG AGAAAAAGAG CACAAATGCA AGGAGGCCGG TTTAGTAGTA GCAAACTCTC TTATTCAAGA GGAATGAACG GTTTCATAAT ATGGATTTTC ATATGGTATA ATGATCAAAT AGCTTTCGAG TGTAGTACGA AGTGTCTTCT TCGAGTTACT AGGAACCAAA ACGGCAGTGA AATTTGATGC GAGTAATGCA GGTTAAGGTT TTAATTATTG GCATTTTGAT AA
Length1712
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10922366.. 10924075
Download Sequence
A.thaliana
AGI-codeAT4G17060.1
DescriptionFRIGIDA interacting protein 2
TAIR curator summaryEncodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.
Alias[FIP2][FRIGIDA interacting protein 2]
Gene coexpression
MR
MR Locus Description
8.42615 Ahg493857
9.05539 Ahg327182 KH domain-containing protein
15.2971 Ahg484400 O-fucosyltransferase family protein
19.8997 Ahg494223 RGPR-related
27.7128 Ahg948528 nuclear RNA polymerase C2
27.8209 Ahg495363
29.1548 Ahg478311 Protein phosphatase 2A regulatory B subunit family protein
29.8496 Ahg491167 P-loop containing nucleoside triphosphate hydrolases superfamily protein
30 Ahg480991
32.619 Ahg897654
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression