Detail


ID : Ahg493989

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493989|fgenesh2_kg.7__3422__AT5G39970.1
Sequence
ATGGGTTCTC TCTGTTTTAT AGAAATGTTT CTTTCTTTCC TTCTGTTGTT TCTTGCCAAA AACTCCTTTT CACATCCTTT ATGTAATGAT TTGACTGCAC CGTTTCATCT GAAGCAACCG CTCGCTTTTT GTCAATTCAA TGGAAGTGTA TGCTGTAACT CCCGAGACGA CTTGAAGTTG CAGAGAGAGT TTAAAGCGGT TAACGTATCT GGCAGATGTT CTCCGCTTCT TAAATCATTA CTTTGCTCAA AGTGTGATCC TTTCGCAGCA GAACTTTTCC GTGTTGAATC AGAATCTAGA CAAGTTCCTG TGCTCTGCAA CTCTACAGTT TCTTCTAGTA AATCAACACA ATCGCTGGCA GACATTGATT TTTGTGCCAC ATTTTGGAAT GAATGCCAGA ATCTCTCTGT AACCAACACT CCTTTTGCTT CTCAAGCTGG AGATGGAGGC AACATCACTT CCACAATATC TGAAATATGG AAATCAAGCA ATGACTTCTG CAAAATTTTT GGTGGAGCTT CAGATGAATC CTCTGTGTGC TTTAACGGCC AAGCAGTTTC ATTTAACATT TCAAAAGTTA CTGGTCCATC TCCTTCAGGC ATATGCCTCG AGAAGCTTGG AAATGGGTCT TATCTTAACA TGGAACCTCA TCCTGATGGT TCTGATCGCG TCTTTCTGTC TGATCAACCC GGGAAGATAT ACTTGGCGAT AGTTCCAGCT CAAGGATCTG GAGAAATTTT GAAAATAGAC GAAACTAACC TGTTTCTTGA TCTTACTGAA GAAGTGCACT TTGATGCTGA GCTTGGTCTC TTAGGAATAG CTTTCCATCC CGAATTTTTG AAAAACGGTA GATTCTTTGC TTCTTTCAAC TGCGATAGAG TTAAGTGGCC AGAATGTTCT GGAAAATGCG CGTGCAACTC AGATATTGAC TGTGACCCTG CAAAGCTAGA TTCTGATAAT GGAGCAACCC CATGTCAATA CCACAGTGTC ATATCAGAAT TCTTTACCAA TGGGACTTAT GTTAGACCGG TGGAGGTAAG AAGAATCTTT ACAATGGGTC TTCCTTTTAC ATCGCATCAT GGTGGACAGA TCTTGTTCGG ACCAAAAGAT GGGTACTTGT ATTTCATGAT GGGAGATGGA GGAAGTAAAG GAGATCCACA CAACTTTGCA CAGAACAAGA AATCATTGCT CGGGAAGATC ATGAGACTTG ATGTTAATAA TGTTCTTGAT GCAAAAATGA TGAATGAGTT TCAGCTATGG GGGAACTATT CTATACCAAA GGACAATCCG TTTTCGCAAG ATAAGAATCT GTTGCCTGAA ATATGGGCCA TGGGAGTAAG AAATCCATGG CGATGCAGTT TTGATTCAGA GAGGCCGTCT TATTTCTTTT GCGCAGATGT TGGCGAGGAC AAATATGAAG AAGTTGATAT GATCACTAAG GGAGGAAACT ATGGTTGGCA TTACTACGAG GGAACTTTGC CATTTAATCC CTCGACTTCT TCTAAAAACA GCAACTCAAC AACAAAGATT GCAAATCCGA TCTTCCCGGT AATGTGGTAC AATCATTCAG ACATAAACCA ACAAGAAGGA TCAGCATCAA TAACTGGCGG ATACTTTTAC CGTTCCTCCA CTGATCCATG CTTGTATGGA ACGTATCTCT TTGCAGACTT ATACGCTGGA ATTATTTGGG GTGGAGCTGA AATTCCAGTT GGTAGTGGAA ACTTCACGAG CTCTCAAATC CCGTTACAAT GCGCTTCGGA TTCGCCAATC CCTTGCTCAT CTGAAACAGA ACCTTCCTCT TCCTCATCTC CACCAATTGG CTTTGTATTC TCCTTTGGAG AAGACAACAA TAAAGACGTC TACTTACTTA CAAGCACTGG TGTTTACAGA ATCGTTCCCT CGAGCCGCTG TAACTTCCAT TGCTCTCTTG AGAACACAAC GTTCTTACCT CCTTCACAAC AGCCTGATCG TTTTCCGCCG TCTTCATCAT TGTCTAAACG ACTACACAAC ATTGGTACTC TTGTTGTAAA TGTCTTAGCT TGGTGTTTTC TTTTTGTAGT TATATAGAGA AAACTAGAGA TTGACCCGCG
Length2090
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21401120.. 21403730
Download Sequence
A.thaliana
AGI-codeAT5G39970.1
Descriptioncatalytics
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.5192 Ahg495652
20.199 Ahg904328 nuclear factor Y, subunit A6
22.0907 Ahg482040 Plant protein of unknown function (DUF828)
22.5832 Ahg901488 ubiquitin-protein ligases
29.8329 Ahg484673 NAC domain containing protein 3
32.187 Ahg941035 Ankyrin repeat family protein
45.3652 Ahg934176
48.4252 Ahg491396 homeobox gene 1
50.7937 Ahg328437 Protein phosphatase 2C family protein
51.4879 Ahg889135 choline monooxygenase, putative (CMO-like)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression