Detail



ID : Ahg494030

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494030|fgenesh2_kg.7__3463__AT5G39590.1
Sequence
ATTTCCAATC ATGGACTCCA ATTTCTCTGA TTATTCCCTC TAATTTCGAA TTTTTGCATC TTCTCCGATC ATCTTCACCA CTATGGGTGC TTCATCTTCA ACAGACAACA AAGAATCATC GGAGAAACGA GAAATCGAAA GCCTTGCTGC TTCAACCGGA GCTCTTCCTC TGCTTCAACG ATCTTTCTCC AAACTTTCCG ATTCTCAAAC CAATACTGTT CCTTTTCAAT CCTTCAAGCA AAGTTTTGGT TTGAGCTACG ATTCAATTAC TACTGAAGGA GGTCAAAAAG TTGGAGACTT GTTTCCCAGA TTGTTGGAGC ATTTAGGATC ATCTTTAGTA GATTTGTTCT TCGTGCCTGA TAAAGAAGGA TTGAGTTGGG TTGAGTTTGC TAGAGGTTAT GTCAAATGTT GTGGAAGAAT GTCGGCTTCG ATGTCTTTCA ACACTTTGTT GAGAGTTTAT TATGTGACAG CTAAAAATGC AGGCTTTTCT CCAAAGCTTG AGTTTGAATC TGATGAAGCT GATTGTAAAA TTAACGGGTC GATTTCGATT AGAGAATTGC TTGTGTTTCT GTGGATTTGT TGGACAATGT CGTGGGATGG TCGAAGTTCT AAAGCCGCTG AAATGAAGGG TTGTTTGTTT CTTCCGGATA TAAGTCATTT GATTCTATCA GCAGTTGTGG CTTGCACTGA TTCTGAATCT GGAAAGAGTT TGGATGTTTG GGAGACTGAT GTTTCTGGAT TAGAACTCGA ACTTCCTATC GGGAAATTCT TAACGTGGGC GTTGATGACA GTGCCTAGCC TCACTGAGTG CCTTTCTCAC TTTTGTAATT CGAGACTTCA AAATTTGACA AGTGTTGAGG ATGGTTCTGG ACCTTCGAAG TCCACTGCTG TAGATGATTC TGCGTCCAAG ACAAGCGAAA ACACCCTTCT AACATGTGGA AGGGCATGGG CAATTTCTTT GACGAGCAAA AGTATAATAA GCGAGGAGAT TTTGAGCTCA TGCTTTCCCT GCAATAGCAA TGAAACCAAT GAACATCTTC TATACCGCTC ATACCATCAC GGGAAAGGCA TGAATCGACT GTGGTCCAAC GTTGAAGGGT ATCATGCTCC GATACTAGTG ATAATTTCTG CAAGCTGTGA AGTCGAACAT GAGGGTACTT CAAGCAAGAG GAAGTGGGTT ATTGGTGCAA TCTTGCAGCA TGGTTTTGAA AACAGGGACG CATTTTATGG AAGCTCTGGG AATTTGTTCT CCATTAGTCC AGTCTTTCAC GCATTCTCAT CTTCTGGCAA GGAGAAAAAC TTTGCGTATA GCCATCTGCA TCCCTCTGGT GGAGTCTACG ACGCACGCCC CAAGCCTGTT GGAATTGGAT TCGGGGGAAC ACTTGGAAAC GAGAGAATTT TCATTGGTGA AGACTTTGCT AAAATCACAG TCCGTCATCA TGCAGTTGAT AAAACTTACC AGTCAGGCTC TCTTTTCCCA AACCAGGGTT ATTTACCAGT AGAGGCTTTG GTTTTAGATA TTGAAGCATG GGGGTTAGGT GGAAATAAGG CTAGGGAAAT TCAACAAGCA TACCAGAAAA GAGAAGAGCT TTTCACTAAC CAACGTCGAA AGATCGACTT GAAAACATTT ACGAACTGGG AAGATTCACC TGAGAAAATG ATGATGGATA TGATGGGTAA TCCTAATGCT CCTAGAAAGG AAGAGAGGTA ATGAACGAAG TTTGATATAT ATACACACAT ACGTTTTTGT CTGTAAAATA TATAAGCAAG AAACTCTTCT GCTATTTATG TACTCGTGGA TTCAATGTGT AAGTTATGTA TACTATTGTT GCCCAAACTC GAACCGGCCT GTTGATTATA TCTGCCCATA AAAATTGGTT TTTATTCCCA GAGCTTCCAT A 
Length1901
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21705447.. 21708100
Download Sequence
A.thaliana
AGI-codeAT5G39590.1
DescriptionTLD-domain containing nucleolar protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.4422 Ahg489219 Transmembrane CLPTM1 family protein
19.4936 Ahg473471 NAC domain protein 13
21.5407 Ahg937667 AMP-dependent synthetase and ligase family protein
23.8747 Ahg497163 nitrate transporter 1.7
25.671 Ahg490342 sucrose synthase 3
33.5857 Ahg489982 glutathione peroxidase 6
35.9166 Ahg334956
42.2374 Ahg485224 alpha/beta-Hydrolases superfamily protein
45.4643 Ahg941635 sucrose synthase 1
46.5833 Ahg355042 pleckstrin homology (PH) domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression