Detail



ID : Ahg494254

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494254|fgenesh2_kg.8__70__AT5G47220.1
Sequence
TAGTTTCTCT GAAAATGTAC GGACAGTGCG ATATAGAATC CGACTACGCT TTGTTGGAGT CGATAACACG TCACTTGCTA GGAGGAGGAG AGAACGAGCT GCGACTCAAT GAGTCGACAC CGAGTTCGTG TTTCACAGAT TTGCCGTTGA AAGAGAATGA TTCAGAGGAT ATGTTAGTCT ACGGACTCAT CAAAGACGCC TTCCATTGTG ACACGTCATC ATCAGACTTG AGCTGTCTTT TTGATTTTCC GGCGGTTAAA GTTGAGCCGA CGGAGACCTT TGAGGTGGTG GAGGAGAAAC CAAAGAAGCA TTACAGAGGA GTGAGACAGA GGCCGTGGGG GAAATTCGCG GCGGAGATCC GTGATCCGGC GAAGAATGGA GCTAGGGTTT GGTTAGGGAC GTTTGAGACG GCGGAAGATG CGGCTTTAGC TTACGATAGA GCAGCTTTTA GGATGCGTGG TTCCCGCGCT TTGTTGAATT TTCCGTTGAG GGTTAATTCC GGTGAACCTG ACCCGGTTCG GATCACGTCT AAGAGATCTT CTTCTTCGTC GTCTTCGTCG TCTTCGTCGT CTTCTTCGTC TTCGTCTGAA AACGGGAAGT TGAAACGGAG GAGAAAAGCA GAGAATCTGA CGTCGGAGGT GAAGTGTGAG GTTGGTGAAG AGACACGTGT TGATGAGTTA TTGGTTTCAT AAGTTTTGAT TTTGTGTGTT TTGTAGTTGA ATAGTTTTGC TATAAATGTT GAGGCGAGTA AAGTGTTTCC CCTGATGTAA ATTACTATAT AATATCAAAC AGAGCCATCT CTATAACTAA ATAGACACTT TAATAAAGCC 
Length830
Protein Sequence
Protein Residue
Map Locationscaffold_8: 314410.. 315300
Download Sequence
A.thaliana
AGI-codeAT5G47220.1
Descriptionethylene responsive element binding factor 2
TAIR curator summaryEncodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.
Alias[ATERF-2][ATERF2][ERF2][ETHYLENE RESPONSE FACTOR- 2][ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2][ethylene responsive element binding factor 2]
Gene coexpression
MR
MR Locus Description
1 Ahg493126 ethylene responsive element binding factor 1
6.32456 Ahg489474 Major facilitator superfamily protein
8.30662 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
10 Ahg929176 RELA/SPOT homolog 2
14.6969 Ahg907524 glutathione S-transferase TAU 15
14.9666 Ahg476162 Protein of unknown function (DUF1645)
15.0997 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
15.8745 Ahg487053 glutathione transferase lambda 1
15.9687 Ahg482959 alpha/beta-Hydrolases superfamily protein
16.1245 Ahg490677 Papain family cysteine protease
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression