| Annotation |
|---|
| Description | jgi|Araly1|488346|fgenesh2_kg.6__1480__AT5G15020.1 |
| Sequence |
GGGAGAGACC TCAAAGGCAA ACAAATTCCG TCGTTGTTTC TTCTTCTTCT TCATTATTCG AGAAATTCTC TCTCTTTCTC GTTCTCAGTC GTAGCAACTC CTCTTCAAAA TCTTTATCTC TCATTTGTTT TTCTGAATTT CACTCTGTTG TCATCGGAAT TGTTCTTCGG GTTTTGCACA ATTCGGGAAT TTGAAGTTTC GCCGGAATTT GATCGGAAGT GTTTTCTTCT CGATTCCGGT CTTACTTGAG AGATCTGATT AATCTCTTCC CGGAGTCATA TCTCTGGGAA ATCTGGACCG CGAGAAACAA TGAAGCGAAT TAGGGATGAT ATTTACGCAA CTGGGTCTCA ATTTAAACGT CCTTTGGGGT CTTCTCGTGG CGAATCATAT GGGCAATCAC CAATCCCTGG AAACGGTGGT ACCGGAGGTG GGAGCATTGG TGACGGGGGA ATTAACACTC AAAAGTTGAC TACCGATGAT GCTTTGACCT ACTTAAAGGA AGTAAAGGAG ATGTTTCAAG ATCAAAGGGA TAAATATGAT ATGTTCCTTG AGGTTATGAA AGACTTTAAG GCACAATGGA TCGATACAGC TGGTGTGATT TCACGAGTGA AGCAGCTGTT TAAGGGGCAT AACAATTTGA TTTTCGGGTT TAACACCTTT TTGCCTAAGG GGTTTGAAAT AACGCTTGAT GAAGAAGAAG CTCCACCAAA GAAAACTGTT AAATTTGAAG AAGCCATAAG CTTTGTTAAT AAAATTAAGA CACGGTTCCA GCACGATGAA CTTGTCTATA AGTCTTTCCT GGAAATCTTA AATATGTATC GGAAGGATAA TAAGGACATC ACTGAGGTTT ACAATGAGGT ATCTACTCTT TTTGAGGACC ACTCGGATTT GCTTGAAGAG TTCACTAGGT TTTTACCGGA CTCGTTGGCG CCTCATACAG AAGCCCAGTT ACTTCGGAGT CAAGCCCAAC GGTATGATGA CCGAGGATCA GGCCCTCCTC TTGTACGTCG AATGTTTATG GAGAAGGATC GCCGACGAGA AAGGACTGTT GCTTCTCGGG GTGACCGTGA TCATAGTGTT GACCGTTCTG ACCTTAATGA TGATAAATCA ATGGTTAAGA TGCACAGAGA TCAGAGGAAA CGTGTTGATA AGGATAATAG AGAAAGGAGA AGCCGTGATT TGGAAGATGG AGAAGCAGAG CAAGATAACT TGCAACACTT TTCAGAGAAA AGGAAGTCAT CGAGAAGAAT GGAGGGGTTT GAAGCTTACT CTGGTCCTGC TTCACATTCT GAGAAAAACA ATCTAAAAAG TATGTACAAC CAAGCATTTA TGTTTTGTGA GAAAGTTAAG GAGAGATTAT GCAGCCAAGA TGATTATCAA GCATTCTTGA AGTGTCTCAA TATTTTTAGC AATGGAATTA TCCAAAGGAA AGATCTGCAG AATTTGGTTT CCGATGTGCT TGGAAAATTC CCTGATCTCA TGGATGAGTT CAATCAGTTC TTCGAGCGTT GTGAGAGTAT TGATGGTTTC CAGCACCTCG CTGGTGTTAT GAGCAAAAAA TCACTTAGTA GTGAAGAAAA TTTATCTAGA TCAATTAAGG GGGAGGAAAA AGAAAGAGAA CACAAACGTG ACCTTGAGGC TGCTAAGGAA AAAGAGCGAT CCAAGGACAA GTACATGGGG AAATCTATTC AAGAGCTTGA TCTATCTGAT TGCGAGCGTT GCACTCCTAG CTACCGGCTT CTCCCTCCAG ATTATCCAAT CCCGTCTGTG CGCCACAGAC AGAAATCAGG AGCTGCTGTC TTAAATGATC ACTGGGTTTC TGTCACTTCT GGAAGTGAAG ACTACTCTTT TAAGCACATG CGCAGAAACC AATATGAAGA AAGCTTGTTT AGATGTGAAG ATGATAGATT TGAGTTGGAC ATGCTGTTGG AATCTGTGGG ATCTGCTGCC AAAAGTGCAG AAGAATTGTT GAATATTATC ATTGAGAAGA AAATAAGTTT TGAGGGCTCC TTCCGGATTG AAGACCATTT CACAGCACTA AATTTAAGGT GCATAGAGAG ACTTTATGGA GACCATGGTC TTGACGTGAC GGACTTAATA CGTAAGAATC CAGCTGCTGC ACTTCCTGTA ATTCTAACTC GATTGAAGCA GAAACAAGAT GAATGGACAA AATGTCGTGA AGGTTTTAAT GTGGTCTGGG CGGATGTGTA TGCGAAAAAC CATTACAAAT CACTTGATCA CCGCAGCTTC TATTTTAAAC AGCAAGATTC TAAGAATTTG AGTGCAAAAG CGCTGGTGTC TGAAATCAAG GACTTAAAAG AGAAGTCTCA GAAAGAAGAC GATGTTGTTC TGTCTATTTC TGCTGGTTAC AGACAACCGA TAATTCCTCA CCTCGAGTAT GAATATCTCG ACAGAACTAT TCATGAAGAC CTTTTCAAAC TAGTCCAGTT TTCTTGTGAG GAGATATGTT CTACAAAAGA GCAGATTGGT AAAGTTCTGA GGCTCTGGGC TAATTTTTTG GAGCTGATGC TTGGTGTTGC ACCCAGGGCC AAGGGGTCAG ATTCTGTTGA AGATGTTGTA GAAACCAAGC ATCACAGTGC ATTTACCAGC GGGGAGGCTA ATGTGAGTTC TGACGCGATT AGTTTGGTTT CCAGGCAACC AAAATTTGCT ACCAATGGAG ATGAGCATGC TTCATCTGGG GTCTCCAAAC ATGGTGGGAC TGGTATTTTG AATAGGGATT CTTCAGGGAA AGAAAATTGT AAGGATGGTG ATCCTTCTAA TAAAGATGTT GCCACCTGTG CTGAAAACCC CCAAAAAGAT CAAGAAATTG GAAATGGAGC CGATAAAAGA TCCGGGGATG TTGATGAAAT AGTGGCCACG ACAAGTGCAT CTTTCCCAAG TGGGGTCGAA AACAATAATG GTAAAGTAGG AAACAGAGAT TCGTCAGGTT TACGGGGAAT TTTATCCAAA CCAAGTGAAG CTATAGATAA AGTTGATAGC ATTCAACGTA CACAGGGAGT TGATATAGGC AGAACTATAG TCTTAGCAAA TGGTGTGCAG TCAGATACTT CTAAAGCCAA CAGTAATTAT GATGAAACTG GTGGTCCATC CAAAATTGAG AAGGAGGAAG GTGAATTATC ACCTGTTGGT GATTCCGAAG ACAACTTTGT TGTTTATGAA GATCATGGTT TGAAGGATAC TGCCAAACCA GAACATTCAG TTGAAGCTGA AGGAGAAAAT GATGAGGACG CTGACGATGA GGATGGTGAT GATGCTTCAG AAGCTGGTGA GGATGCTTCG GGAACTGAAT CTATTGGTGA CGAATGTTCA CAGGACGATA ATGGCGTGGA GGAAGAGGGT GAGCATGATG AGATTGATGG TAAAGCTGAA AGTGAAGGAG AGGCAGAGGG AATGGAGTCA CATCTTATAG AAGACAAAGG GTTGTTTCCA TCATCAGAAC GTGTTCTATT ATCAGTTAAG CCTCTTTCAA AGCATGTAGC TGCAGCGGCT TTGCTTGATG AGAAAAAAAA AGATTCCAGA GTTTTCTACG GGAATGACGA CTTTTATGTT CTTTTCAGGC TTCATCGAGT GAGTGCAATC GTTTCTGATG ATTTGCTTTC TCACATCCTG TACGAGAGAA TTCTGTCTGC AAAAACATAT TGCTCCGGCG GTGAAATGAA ACGGAAAAAC ACAAAAGATA CTAGTTCACC AGATCCTTAT GCAAGGTTTA TGAATGCTCT GTTTAGTCTG CTTAATGGCT CAGCTGAAAA TTCCAAGTTT GAGGATGAAT GCCGAGCTAT TATTGGAAAC CAGTCATATG TTTTATTCAC CTTGGAAAAA CTGATATACA AATTGGTTAA ACAGCTTCAA GCTGTTGTAG CTGACGATAT GGACAATAAG CTTCTTCAGT TGTATGAGTA TGAGAATTCC CGGAGACCTG GGAGGGTATT TGACTCGGTA TATTATGATA ACGCTAGGAT CCTCCTTCAT GAGGAAAATA TTTATCGGTT GGAATGTTCT TCCTCTCCAT CTCGTTTGTC AATCCAGCTT ATGGATAACA TCATTGAAAA GCCCGAAGCT TATGCAGTTT CCATGGAACC CACGTTTGCG AGTTATTTGC AAAATGAGTT TCTCTCCAAC TCATCAGGGA AAAAAGAGCT ACAGGACATT GTGTTACAAA GGAACATGCG TGGATACACT GGTCTGGATG ATCTTGCAGT AGCTTGCAAG GCCATGGAGG GCGTACAAGT AATTAATGGC CTTGAGTGCA AGATGTCTTG CTCTTCCTAC AAGATTTCGT ATGTTTTGGA CACAGAGGAT TTCTTCCACA GGAAGAAGAA ACAGAAGAAG AGCAACAACT TGTCACTGGA TAAATTATCA CAGAATAGAA TAGAAAGATT CCACAAGTTT CTCTCAGCTT CAAGATGACA GCAAACAAGA ACACGCAAAA CTTTCATCTT CTCTTTACTT CAACACACAA AGGAAGGTTA GAGTCGGACC AAGTTCTCTC TGCAACCTTC CCTATCCTTG CACAGTAGAG TGTATTTTCT AATTTTAATC TTGATATTAG GCTTGAAAAA AAATGTATGT TTGTAAATAT TGGAAACACA TACACGGTTA TGCTCTTGGT TTGTATCTAC ATAGACAGTT TCAAAATTCT TCTTATATAA ATATGATTTT AAAA |
| Length | 4684 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5852056.. 5859255 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G15020.1 |
| Description | SIN3-like 2 |
| TAIR curator summary | Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). |
| Alias | [SNL2][SIN3-like 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.7082 |
Ahg470391 | Transducin family protein / WD-40 repeat family protein |
| 6.7082 |
Ahg492421 | MAC/Perforin domain-containing protein |
| 7.54983 |
Ahg494576 | Homeodomain-like transcriptional regulator |
| 8.48528 |
Ahg479509 | RING/U-box superfamily protein |
| 14.0712 |
Ahg481833 | pumilio 3 |
| 14.2829 |
Ahg487696 | GC-rich sequence DNA-binding factor-like protein |
| 15.0665 |
Ahg934335 | TSL-kinase interacting protein 1 |
| 17.8885 |
Ahg950187 | DNA topoisomerase 1 beta |
| 18.2483 |
Ahg475328 | aminophospholipid ATPase 3 |
| 20.199 |
Ahg486482 | multidrug resistance-associated protein 9 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|