Detail


ID : Ahg494876

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494876|fgenesh2_kg.8__692__AT5G48230.2
Sequence
TTTAGAAGGA CAGATCACAT AGCCGTCGTG TTGCTCTTCA TCGTAGTTAT CGTCGCTGAT TCACCAACGA CAACAACATC ACAAGAAAGC GTCCTCTTTT ATAGGACCCT CTCTCTGTCT TTCTCTCTCC AGTTATATTG TAGAATTCGT TGTCATATTC GTCGCTCTCT TCTGGAATTG AAGTGTCAAG ATTAGTAATG GCCCATACAT CAGAATCTGT GAAGCCTAGA GATGTTTGCA TTGTGGGTGT TGCACGTACT CCAATGGGTG GCTTTCTTGG ATCTCTTTCG TCTTTACCTG CCACAAAGCT TGGATCTTTA GCTATTGCAG CTGCTTTGAA GAGAGCAAAT GTTGATCCAG CTCTTGTTCA AGAAGTTGTT TTTGGCAATG TTCTTAGTGC TAATTTGGGT CAAGCTCCTG CTCGTCAGGC TGCTTTAGGT GCAGGAATCC CTAACGCTGT TATCTGTACT ACAGTTAACA AAGTTTGTGC ATCAGGCATG AAAGCGGTAA TGATTGCTGC TCAAAGTATC CAGTTAGGGA TCAATGATGT AGTTGTGGCG GGTGGTATGG AAAGCATGTC TAATACACCT AAATATTTAG CAGAAGCAAG GAAAGGATCT CGATTTGGTC ATGATTCTTT AGTAGATGGA ATGCTTAAGG ATGGACTATG GGATGTCTAT AATGACTGTG GGATGGGAAG TTGTGCAGAA TTATGCGCTG AGAAGTTTGA GATTACAAGA GAGCAGCAAG ATGACTATGC AGTTCAGAGT TTTGAGCGTG GTATTGCTGC CCAGGAAGCT GGCGCCTTCA CATGGGAAAT CGTCCCGGTT GAAGTTTCTG GAGGAAGAGG TAGGCCATCA ACCATTGTTG ACAAGGACGA AGGTCTTGGG AAGTTTGATG CTGCCAAATT GAGGAAACTC CGTCCTAGTT TCAAAGAGAA TGGAGGGACT GTTACAGCAG GAAATGCGTC TAGCATAAGT GATGGTGCAG CTGCCCTTGT CCTAGTGAGC GGAGAGAAGG CTCTTCAGCT AGGACTTCAA ATATTAGCAA AAATTAAAGG GTATGGTGAC GCAGCTCAGG AACCAGAGTT TTTCACTACT GCTCCTGCTC TTGCTATACC AAAAGCCATT GCACATGCTG GTTTGGAATT TTCTCAAGTT GATTACTACG AGATCAATGA AGCATTTGCA GTTGTAGCAC TTGCAAATCA AAAGCTATTA GGGATTTCTC CGGAGAAAGT GAACGTAAAT GGAGGAGCTG TCTCCTTGGG ACATCCTCTG GGCTGCAGTG GCGCCCGTAT TCTAATCACA TTGCTTGGGA TACTAAAGAA GAGAAACGGA AAGTACGGTG TGGGAGGAGT GTGCAATGGA GGAGGAGGTG CTTCTGCTCT TGTTCTTGAA CTCCTTTGAT GCATTATGAA TTCAGGTTGG TAAACTAAAT AGATGGATCT ATCTCTCTTC CAACTTCCAA GAGTCAGTAA TTGCAGTTCA AGTTTTATGT TAGTTGGGTC TCTCAATAAA GGAGTGATCG TTGATGTTAA GTCTATTTAT TTATATGAAC TCAGCTTCTT TTTTTTTTTC TTTCTGGTGA CAGTCAGTAG ATGATGATTT ATTCTCATGT ACTGATTGAA ACGTCGACCA AGATTTGACA TTTGATAGCT AAATTTTAAG TACACAATGT GCATG
Length1685
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10820529.. 10823608
Download Sequence
A.thaliana
AGI-codeAT5G48230.2
Descriptionacetoacetyl-CoA thiolase 2
TAIR curator summary
Alias[AACT2][ACAT2][EMB1276][Acetoacetyl-CoA thiolase 2][acetoacetyl-CoA thiolase 2][EMBRYO DEFECTIVE 1276]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg489803 cytosolic invertase 2
10.8167 Ahg480236 SH3 domain-containing protein
15.2971 Ahg486203 guanylate kinase
16.2481 Ahg899683
18.6548 Ahg492704 Tetratricopeptide repeat (TPR)-like superfamily protein
22.2486 Ahg896503 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
27.2029 Ahg930539 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
28.8617 Ahg488385 tRNA/rRNA methyltransferase (SpoU) family protein
29.3939 Ahg931973 Secretory carrier membrane protein (SCAMP) family protein
31.4325 Ahg474400 histone H2A protein 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression