Detail



ID : Ahg896503

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896503|Al_scaffold_0005_469
Sequence
ATGTCTGAAG ACCCGGAGTA CCGTTGTTTC ATTGGTGGGC TTGCTTGGTC AACGTCTGAT CGTGGTCTCA GAGATGCCTT TGAGAAGTAC GGTCACCTCG TTGAGGCCAA GGTGGTTCTT GACAAGTTTT CTGGTCGCTC CCGTGGTTTT GGGTTCATCA CTTTTGATGA GAAAAAAGCT ATGGATGAAG CTATTGCAGC AATGAATGGA ATGGATTTAG ATGGGCGAAC TATCACTGTT GATAAAGCCC AGCCACATCA GGGTGGGTCA GGCAGAGATC ATGATGGAGA TCGCAGTCGT GATCGTGGAT ATGATCGTGA TCGTAGCCGT CCCTCTGGTG GGCGCGGTGG TGGAGATTGC TTTAAATGTG GCAAGCCTGG ACATTTTGCA AGGGAGTGTC CTTCTGAAAG TAGTAGAGAT GGTGGCGGAA GGTACAGCTC AAAGGACGAT AGGTACAGTG CTAAGGACGA TAGGTATGGT GCAAAAGAGG ATAGGTACGG CTCCAAGGAT GATAGGTACA GCTCCAAGGA TGATAGGTAC AGTGCAAAAG ATGATAGGTA TGGTGCAAAG GATGATAGGT ATGGTAGTAG GGATGGTGGG GGTAGTCGCT ATGGACCTGA TCGCAGTGGA GAACGCGCTG GAGGACGTAG CCGGGATGGT GGCAGCCGTG GAGGTCCAGG AGGTGAGAGG CACAGTCGTG CTACTGCTCC ATATGACCGC CCCAGAGCTG GTGGCTTTCA CTAG 
Length744
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2641707.. 2642783
Download Sequence
A.thaliana
AGI-codeAT3G26420.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
TAIR curator summaryZinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.
Alias[ATRZ-1A][RZ-1A][RZ-1A]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg478119 RNA-binding (RRM/RBD/RNP motifs) family protein
6.32456 Ahg920166 eukaryotic initiation factor 4B2
9.8995 Ahg470642 Ribosomal protein S5/Elongation factor G/III/V family protein
13.6015 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
16.5227 Ahg488817 ARM repeat protein interacting with ABF2
22.2486 Ahg494876 acetoacetyl-CoA thiolase 2
26.3249 Ahg933591 helicase in vascular tissue and tapetum
27.9285 Ahg489891 Nascent polypeptide-associated complex (NAC), alpha subunit family protein
28.5307 Ahg471845 proteasome subunit PAB1
28.9828 Ahg928387 Sterile alpha motif (SAM) domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression