Detail



ID : Ahg495227

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495227|fgenesh2_kg.8__1043__AT5G51545.1
Sequence
AAAAATGGCG CTACAAATCC ACTCTTCGTG TTTCTTCTCG ACGAGACCCT ATCATCTCTT CATCACTACC AGAAACCCTA GATTCGCAAT CAAATGTCAA AATTCCCAAA TCGAATCCGA GACAACAGAG GATCCAGCTC AACCCAAGAA TTCAAGCGCT TCCGGCGTAG GATTCGGTTC ATCGGCGTCT TCTTCTCCGG CTAAGAAATT GAGTGCAGCT ACATCGGGAA TTAAGAAAGG AAAAGGGAAG AGAGAGGTGA ATCGGCGTGC TCCTGTGGAG AAACCTGTGT TTATGAGCGA GGAAGGAGCG GCCAAGGCAG AGGAACAGAG ACGGAACGAG AACGCGTTTC TTCTTACTTG GCTTGGGCTT GGTATCGTCA TCCTCATCGA AGGGATTCTT CTCGCCGCTT CAGGATTCCT CCCCGAAGAG TTGGATAAGT TGTTTGTCAA GTATGTGTAT CCAGTGTTCA CTCCATCGGT TGGGTTATTT GTGGCTGGGA CAACTGCATA TGGAGTTTTG AAGTACATAC AGAATGAGAA AATGAAGGGT CAAGAGTGAT ACTATACAAC CATGGATATT CTAGCTTTCC AGTGATTGAC GTTAAGTGTG TTGCAAGTAG GAGTTTGTGT ATTGATCTGA CCTTAGTCAT TGTATATGCA GAGAGAAAAT CAGTTTGAAG TTATTCATGT GCCATTATCA TTTTATC 
Length707
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13736447.. 13737614
Download Sequence
A.thaliana
AGI-codeAT5G51545.1
Descriptionlow psii accumulation2
TAIR curator summaryEncodes LPA2 (low psii accumulation2), an intrinsic thylakoid membrane protein required for efficient assembly of Photosystem II.
Alias[LPA2][low psii accumulation2]
Gene coexpression
MR
MR Locus Description
11.0905 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
24.0624 Ahg326030
31.1288 Ahg482168 glutamate receptor 5
31.305 Ahg478942
33.7343 Ahg486548 Transketolase
34.0147 Ahg324617 embryo defective 1703
35.7211 Ahg922229 CLP protease P4
36.1801 Ahg490089 tRNA synthetase class I (I, L, M and V) family protein
36.2767 Ahg495247 phosphoglucomutase
37.4967 Ahg478348 lycopene cyclase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression