| Annotation |
|---|
| Description | jgi|Araly1|478348|fgenesh2_kg.3__1049__AT3G10230.1 |
| Sequence |
CTCTCTCTCT GGGAAGAAGA TAATTGTCTC CATCTCCATG AAGCTTCTGC TTCTGGGTAA GTTTTGTGGT CTTCGTTCAT CTTTTCTCTA GAGATTTCAT ATTCGCAATC CCTCTGGTTA GAAATCGTGT CTGGTGATTT TTGAATTATA TCCTTTTGGT GATTTTGGGG GAATTCGATG GATACTCTGT TGAAAACACC CAACAAGCTC GATTTTTTCA TCCCTCAGTT TCATGGGTTT GAGAGATTAA GCAGTAATAA TCCAAACCCT GCAAGGGTTA GGCTTGGTCT GAAGAAAAGG GCTATCAAAA TTGGCTCTAG TGTTGCCAGT GGTAGTGCTG CTCTTTTGGA TCTTGTTCCT GAAACTAAGA AGGAGAATCT TGACTTCGAG CTTCCTTTGT ACGACACTTC CAAGAGTCAA GTTGTTGATT TGGCTATTGT TGGTGGTGGT CCTGCTGGTT TAGCTGTGGC TCAGCAGGTT TCTGAGGCTG GACTCTCTGT TTGTTCCATT GATCCTTCTC CAAAGCTCAT ATGGCCTAAC AACTATGGAG TTTGGGTTGA TGAGTTTGAG GCTATGGATT TACTAGATTG CTTAGACACC ACATGGTCTG GTGCTGTTGT CTATGTCGAT GAAGGTGTCA AGAAGGATTT AAGCCGGCCT TATGGGAGAG TTAACCGGAA ACAGCTCAAA TCCAAAATGC TTCAGAAATG TATTACCAAC GGTGTTAAGT TTCATCAGTC TAAGGTCACT AACGTGGTTC ACGAGGAGGC AAACTCCACT GTGGTTTGCA GCGACGGTGT GAAGATTCAG GCTTCGGTGG TTCTTGATGC CACCGGGTTT TCCCGATGCT TGGTTCAGTA TGACAAACCG TACAACCCTG GGTACCAAGT AGCTTACGGG ATTATAGCTG AAGTCGATGG TCACCCTTTC GATGTAGACA AAATGGTGTT CATGGATTGG AGAGACAGAC ATCTGGACTC ATATCCTGAG CTTAAAGAAC GGAACAGCAA GATCCCAACA TTCTTGTACG CGATGCCGTT TTCTTCCAAC CGAATATTTC TTGAAGAAAC TTCTTTAGTT GCTAGACCTG GTCTGCGTAT GGACGATATC CAAGAAAGAA TGGCTGCTAG ACTGAAACAT TTGGGGATCA ATGTGAAGAG GATTGAGGAA GACGAGCGTT GTGTGATCCC AATGGGCGGT CCTTTACCAG TCTTACCTCA ACGAGTTGTC GGGATTGGTG GGACAGCGGG AATGGTTCAT CCCTCAACTG GTTACATGGT AGCTAGGACT CTTGCAGCTG CGCCAATAGT TGCAAACGCC ATTGTGAGAT ACCTCGGTTC ACCGAGTAGT AACAGCCTAA GAGGAGATCA ACTCTCTGCT GAGGTATGGA GAGACTTGTG GCCTATTGAA CGGCGCAGAC AGAGGGAATT CTTCTGTTTT GGAATGGATA TTCTGCTGAA ACTCAACTTA GACGCTACTA GAAGGTTCTT TGATGCATTC TTTGATCTGC AACCTCATTA CTGGCACGGA TTCTTGTCTT CCAGGCTGTT TCTCCCGGAA CTGTTGTTCT TTGGGTTGTC GCTCTTCTCG CATGCTTCTA ATACCTCAAG ATTGGAGATC ATGACAAAGG GGACTGTTCC TCTTGCTAAG ATGATCAACA ATTTGGTACA AGATAGAGAC TAAGGACCAG AAACTTAGAC ATATAAGTAC ATCTGTTCTT TGGTTCTTGA CCCAGTGGTA TATCCGCATT GCAAGTCGTC GCATAATTGT GTATAAACCG CAGATCATAA CCTGAATCCT TGTGAAATCA AAGTGTTACT AGTTATTCTT CATTAAAATT AATATTTTGT GCTGCATCGT GTTTTCACCA ACTCTTGTAA ATCCAAAACT AGAGGCAAAA TGTAATAAGA TAAAAGAATT GATGTTGAAC ACAAAAGCAA CTCTTTCAAA CTC |
| Length | 1953 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3827441.. 3829267 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G10230.1 |
| Description | lycopene cyclase |
| TAIR curator summary | Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene. |
| Alias | [AtLCY][LYC][lycopene cyclase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg495389 | FTSH protease 11 |
| 14.7986 |
Ahg484330 | Hydroxyproline-rich glycoprotein family protein |
| 14.8324 |
Ahg888526 | chloride channel E |
| 15.3297 |
Ahg944563 | Protein of unknown function (DUF3506) |
| 18.8944 |
Ahg479158 | acyl-activating enzyme 7 |
| 20.2731 |
Ahg482018 | FtsH extracellular protease family |
| 21.8174 |
Ahg480058 | |
| 22.2036 |
Ahg327981 | |
| 22.5832 |
Ahg944743 | Myosin heavy chain-related protein |
| 23.7487 |
Ahg484947 | RNA binding (RRM/RBD/RNP motifs) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|