Detail



ID : Ahg495330

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495330|fgenesh2_kg.8__1146__AT5G52580.1
Sequence
ATGAGTATGG AAGCATCGGA GCTACAGGAT CTCTCCGACG ACGCCGATTA CGCTGCTTCT CAACAACAAG GATCGGCTAG TATGATGCGT AGCGATAGCG GAAAGAGAAG TTCACCTAGT GAACACGAAG ACGCTGAATT GATATATTTG AAAGATAACG TTGCAATTCA TCCTACACAG TTCGCATCTG AGAGGATTAG TGGTAGATTG AAGTTGACTA AGCAAGATTC TGTTCTCTTC TTGTCGTGGA TTCCGTACAA GGGACAAACT TCAAATGCAA AGTTATCAGA AAAAGACAGG AGTCTTTATA CCATCACCGC GGTTCCGTTT ACTGAAGTGA GGTCCATTAG GCGACACACT CCTACTCTCG GATGGCAGTA TGTAATTGTT GTCCTGTCTT CTGGACTTGC ATTTCCGCCT CTGTACTTCT ATAATGGAGG AGTCAGGGAG TTTCTGGCCA TAGTGAAGCA GCATGTTTTT CTTGCAAGGT CGTCAGAAGA TCCAAATGTG TTCATTGTGA ATGATTTTCA GAGTCCCTTG CAGAGAACTT TGTCATCATT GGAGCTGCCA AGTTCACTGC CTGTAGCAAG TGGACAATCA GTATACCCCT TAGACGGAGG TTCTTCTAAC GAAAATCAAG GGAGAACAAG TGCAGATATT GGTAATAGAG TTTCTAGTGT TATCCAGTCT GGTCTGAGAA AGCACAAGAA TCATGATCCA ACTCGGGATC TTTCAATCCA TCTTCTAGAG AAGTTTTCTC TGGTTACCAA ATTTGCTCGA GATACAACTA CTCAGTTGTT TTCCGAAAAC AATGGCTTTG GTTCCGTTGA CAAGAGATGG AATAACCAAC CCGTACATAG TTATCCTGAA AAGTTGTCAA ATATTGCTGA GGAAAAGCAT AATGAAATCC GTCATAGTTA TTCTGAAAAT GACCTTCTCA AGGATGAAGA AATTTCTAAT GACATTGATG TCCCTGCGGA TCCCTTAGAG TTTAATAAAT TAAGTTTGGT GTGGGGAAAG CCAAGGCAAC CACCAATGGG GCATAAAGAG TTCACAGCAT TGTTGGATTC TGAAGGGCGA GTTGTGGAAT CAAAAGCTCT TCGGGAGAGA GTTTTCTATG GAGGCATTGA GCACCAATTG CGAAGAGAGG TATGGCCCTT TCTCTTGGGA TATTATGCAT ATGACTCGAC ATATGCAGAG AGAGAATATC TTCGATCTGT CAAACGGATG GAATATGCAA CATTGAAACA GCAGTGGCAG AGCATTTCCC CTGAACAAGC AAAAAGGTTC ACAAAATATC GGGAGAGAAA AGGATTGATA GATAAAGATG TGGTAAGAAC TGATAGGGCA TTTGAATACT ATGAAGGGGA TGACAATCTA CATGTCAATA GCATGCGTGA TATTCTGTTG ACATACTCCT TCTACAATTT TGACCTGGGT TACTGCCAGG GAATGAGTGA TTATCTGTCT CCTATCTTGT TCGTGATGGA GGATGAATCA GAATCCTTTT GGTGTTTCGT GGCACTGATG GAACGCCTCG GACCCAACTT TAACCGTGAC CAGAATGGGA TGCATACTCA GCTCTTTGCA CTCTCAAAGC TGGTAGAGTT GCTCGATACC CCGCTGCATA ATTACTTCAA GCAGAATGAC TGCTTAAATT ACTTCTTCTG TTTCCGCTGG ATCCTGATTC AGTTTAAAAG GGAATTTGAG TACGAGAAGA CAATGCAGCT GTGGGAGGTG ATGTGGACCC ACTACCTCTC GGAACATTTT CACCTATATG TTTGTGTGGC GGTCTTGAAG CGATGCCGCA GCAAGATAAT GGGAGAACAG ATGGATTTTG ACACTCTCTT AAAGTTCATC AATGAGCTGT CTGGGCATAT TGACCTCGAT TCAACAGTCA GAGATGCCGA AGCACTTTGC ATATGTGCTG GTGAAAATGG TGCTGCTAGT ATTCCTCCAG GAACCCCTCC TTCTTTACCC CTTGATGACG GTACCTTATA TCCTCAGGAA GATGATGTTT TGTAAGTAAT ACAACTTTGC TTTTTCTTCA AGACATGTTA CCAAAATTTG GATTGCTTTG ACCAGAAATC CCATACAATG ATTAAGTCAA TGGATATAAG CTTTTTT 
Length2127
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14303700.. 14308734
Download Sequence
A.thaliana
AGI-codeAT5G52580.2
DescriptionRabGAP/TBC domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.245 Ahg487446 NC domain-containing protein-related
17.5499 Ahg490773 TLD-domain containing nucleolar protein
21.2838 Ahg496313 small G protein family protein / RhoGAP family protein
23.4521 Ahg488835 calcium-dependent protein kinase 19
24.2693 Ahg480691 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain
24.3721 Ahg483260 Insulinase (Peptidase family M16) family protein
28.1425 Ahg495812 DNA ligase IV
28.9482 Ahg924211 Esterase/lipase/thioesterase family protein
31.1288 Ahg491836 gamma-glutamyl transpeptidase 4
32.4808 Ahg489168 Zinc finger, C3HC4 type (RING finger) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression