Detail



ID : Ahg495706

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495706|fgenesh2_kg.8__1522__AT5G56180.1
Sequence
ATGATTCTTA GGAAAGTATG GGGATCGGTG TGGAACCGAT CGAATAGTGG CAAGGATTTG GTGACTCATC AGAGAGCGAT GACTCATGTT GCTCCTCCTC TGTTGTTGTC TTCTTCTTCG TCTCTTGGTG CGTTTGATCA GCTACCGATG GATATTGTAG TTCAGATATT GATGATGATG GAGCCAAGAG ATGCTGTGAA ATTAGGCTTA ACTTGCAAAG CCTGGAAATG TGTAGCTGGT GGTAATCGTC TCTGGATATT TTATCTCCAG TGTTCTCAAG AGCCATGGGA CTCCATTTTC TTCGCTGAAA CTAGTTTGCG TTCTGGTTAT CCTCTCCGAA TGATTTCTAG TCAATCAGGA GACTTGTCGT TTATGCACAT TTATAGTCAG AGGGCACAAG TTCCTGGTTC TATCATTATC GATGGTGGTT CTGGATATTG TAAGTTTGGT TGGAGCAAGT ATGCTTCACC TTCTGGACGT TCTGCTACTT TTTTGGAATT TGGTAACATT GAGTCGCCCA TATATGCTAG ACTTCAACAG TTCTTCGCTA CCATTTTCAC CAGGATGCAG GTGAAGCCCT CTATGCAGCC AATAGTGGTA TCACTACCTC TCTGCCATTT TGATGATACT GAATCGGCCA GGGCATCAAG GCGGCAACTC AAGACTGCTA TCCTCAATGT CTTATTTGAC ATGAATGTTC CTGCAGTGTG TGCAGTTAAT CAGGCTGTGT TAGCTCTATA TGCAGCACGG CGGACATCTG GAATTGTTGT CAACATTGGT TTCCAAGTCA TCACCATTCT TCCAATTTTG CATGGTAAGG TGATGCGCCA GGTAGGTGTA GAAGTCATTA GTTTTGGAGC ATTGAAACTC ACGGGCTTCC TTAAGGAGAA GATGCAAGAG AACAACATGT CCTTTCAATC ACTCTACACT GTTCGTACTC TTAAAGAGAA ACTGTGTTAT GTGGCTCTTG ATTATAAAGC TGAACTTTCA AAAGACACAC AAGCTTCAGT GGAAGTGTCA GGTGAAGGAT GGTTTACTTT GTCAAAAGAG CGTTTCCAGA CAGGGGAGAT ATTATTCCAA CCACGTCTCG CTGGAATGCG TGCAATGAGT CTGCACCAGG CAGTCTCGCT CTGTATGGAC CACTGTGATG CAGCGGGACT TACAGGTGAC GATAGTTGGT TCAAGACTGT AGTCCTAACT GGGGGAAGCG CGTGTTTGCC TGGACTCTCA GAGAGGCTAG AGAGAGAACT GCGTGAACAC CTTCCGTCAT CTATAAGCAA TGGAGTCAGA GTAATCCCTC CTCCGTGCGG CGTGGACACA TCATGGCATG GGGCAAAGCT TATCAGTAAC TTGAGCACCT TTCCTGGTCC TTGGTGTATC ACAAGGAAGC AGTTCCGTCG TAAGTCGAGA CTCATGTGGT GAATCTTTCC TACCATCGCG AAGACAGAGT GAGAGGCAGG TTGTCAGCTG TTCTAAGGTA CTTTGCAAGT CTTTAGATAA GTAAGTATAT GTATAGTGTC ATACTTGATT ATACTCAAAA GCCACAAACA GCAAACA 
Length1557
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16322292.. 16325899
Download Sequence
A.thaliana
AGI-codeAT5G56180.1
Descriptionactin-related protein 8
TAIR curator summaryencodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.
Alias[ARP8][ARP8][ATARP8][actin-related protein 8]
Gene coexpression
MR
MR Locus Description
11.5326 Ahg928910 aromatic and neutral transporter 1
12.1244 Ahg350042 glucuronidase 2
19.9249 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
25.9808 Ahg496133
26.8328 Ahg488204 pheophytinase
27.9821 Ahg473344 organellar single-stranded DNA binding protein 4
29.8998 Ahg919779 branched-chain amino acid transaminase 2
30.8221 Ahg487487 Protein phosphatase 2C family protein
31.9374 Ahg480439
31.9374 Ahg910841 NB-ARC domain-containing disease resistance protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression