| Annotation |
|---|
| Description | jgi|Araly1|496244|fgenesh2_kg.8__2060__AT5G60920.1 |
| Sequence |
CAAAAATTTC TCATTGCTTC TCTCGTTCCA AAAAAACTCT TGGTGCTATC TTCTATAAGT CCACTCCTCC TTCAAGCAAA GCACCTTCCT CTTCTTCTTC TCACTCTGAG ATTGGTTTAA TCTTAAACCA GACCCATCTA AGGGATCTGG AACAAGCTTC GTCTCTGGTT CTGCTCTGAT CATCAGAGAA TTAAAAATGG AGTCTTTCTT CTCCAGATCC ACCTCCATCG TCTCCAAATT GAGTTTCTGG GCCTTATGGA TCGTGTTCTT GATTTCTTCA TCTTCTTTTA CTTCGACAGA AGCATATGAT GCGCTTGATC CAGAAGGCAA CATTACAATG AAATGGGATG TCATGAGCTG GACTCCTGAT GGCTATGTTG CCGTGGTTAC GATGTTCAAC TTCCAGAAAT ACAGACACAT TCAATCTCCG GGATGGACAT TAGGCTGGAA ATGGGCAAAG AAGGAAGTTA TTTGGAGTAT GGTTGGAGCA CAAACAACTG AACAAGGTGA TTGTTCAAAG TACAAAGGAA ACATACCGCA TTGTTGTAAG AAAGATCCAA CAGTTGTAGA CTTGCTTCCT GGGACTCCTT ATAACCAGCA GATTGCCAAT TGCTGCAAAG GTGGTGTCAT GAACTCATGG GTACAAGACC CTGCCACCGC GGCTAGCTCC TTCCAGATCA GTGTTGGCGC TGCTGGAACC ACAAACAAAA CCGTTAGGGT GCCAAGAAAC TTCACTCTCA TGGGACCTGG TCCAGGCTAC ACTTGTGGTC CAGCAAAGAT TGTCAGACCA ACAAAATTTG TCACGACCGA CACACGGAGA ACCACCCAAG CTATGATGAC ATGGAACATT ACGTGCACAT ACTCGCAGTT CCTTGCTCAA AGAACTCCAA CTTGCTGTGT TTCTTTATCT TCTTTCTACA ATGAAACTAT TGTCGGATGT CCAACTTGTG CTTGCGGATG CCAAAACAAC AAAACTGAAT CCGGTGCCTG CCTCGACCCG GACACACCAC ACTTAGCCTC GGTTGTGTCA CCTCCAACAA AGAAAGGCAC GGTATTACCG CCATTAGTGC AGTGCACGAG ACACATGTGC CCGATCCGAG TACATTGGCA CGTAAAGCAG AACTATAAAG AGTATTGGCG AGTGAAGATC ACAATCACAA ACTTCAACTA TCGATTGAAC TATACACAAT GGAACCTCGT TGCTCAACAT CCAAATCTCG ACAACATCAC TCAAATCTTC AGCTTCAACT ACAAATCTCT CACTCCGTAC GCTGGATTAA ACGATACGGC GATGCTATGG GGAGTGAAGT TCTACAACGA TTTCTTATCA GAAGCAGGTC CTCTTGGGAA TGTTCAATCA GAGATTTTGT TCCGTAAAGA TCAATCAACC TTCACATTCG AGAAAGGTTG GGCTTTTCCT CGAAGGATTT ACTTTAATGG AGACAACTGC GTCATGCCTC CTCCTGACTC TTACCCTTTT CTTCCCAACG GTGGTTTCCG GCTACAATTC TCATTCTTGG CCGCCGTGCT CCTCCCTGTT CTGATCTTTT TCTTCTTCTC TGCCTAATCT CGGATTTACG GTTTTGCCAC TGGTATGGTT AGGGTTCGAC GGTTGAGTGG TATAAACGTT ATTTATGATT CTTTATCTTT TGATACCTTT TAATATATAT AGTTTTCAAC TTCGTTGTTT TTAAAAGAAA TTTATATCCC TGTGTTCTGT TGGTCCGTCG TTGGAGAATA TCGGAAACAA AAAAAAAAAG ATCATAATGT TAGATATTGT AAACTTTGTT TCCTACTGTT ATATACTTTA CTTTAT |
| Length | 1816 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 18585669.. 18588591 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G60920.1 |
| Description | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family |
| TAIR curator summary | Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. |
| Alias | [COB][COBRA] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg936755 | UDP-glucose 6-dehydrogenase family protein |
| 16.7332 |
Ahg492137 | PLC-like phosphodiesterase family protein |
| 21.4942 |
Ahg479890 | Leucine-rich repeat protein kinase family protein |
| 29.8664 |
Ahg940449 | cellulose synthase 5 |
| 36.9865 |
Ahg472333 | Phosphofructokinase family protein |
| 37.1483 |
Ahg476133 | glucosyl transferase family 8 |
| 38.7298 |
Ahg917547 | Leucine-rich repeat protein kinase family protein |
| 38.7298 |
Ahg478515 | FASCICLIN-like arabinogalactan protein 18 precursor |
| 39.5474 |
Ahg483684 | FASCICLIN-like arabinogalactan protein 8 |
| 48 |
Ahg930748 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|