| Annotation |
|---|
| Description | jgi|Araly1|492137|fgenesh2_kg.7__1570__AT4G26690.1 |
| Sequence |
TCTCTCTCTC TCTCTCCACC TCTCTTTCTC TCTTAAATCT CGTTCTGTCT CCGGCGAAGA CGCCGGCGGG AAGCTAAAAG ATAATCCGAC AATGCGAGGA TTACGAGCTT CATCGCTTCT ACTTTGTGGT GTTGTTCTGA TTCAGCTGTT TGCTGCTCAA ATCGATGCCC AAAAACCTAA AAGTCCATGG CCAACGCTCA CTGGTGATCC TCCCTTTGTG ATAGCTCGGG GTGGGTTTTC TGGATTGTTT CCAGATTCGA GTTACGATGC TTACAATTTC GCAATGTTGA CAAGTGTATC AGATGTTGTT CTATGGTGTG ATGTTCAGCT AACCAAAGAT GCTCTTGGTA TTTGCTTCCC TGATTTAACT ATGAGCAATG CTTCATCTAT TGAAGTTGTT TACCCTACTC GACAAAAATC TTACCCGGTT AACGGAGTTC CTACTTCCGG TTGGTTCACC ATTGATTTCT CCTTGAAAGA TCTCAAAGCT GTTAACCTGA TACGAGGTAT ATTATCTCGG TCTGAAAAAT TCGATGGTAA TTCTAACCCG ATTATGACGG TTCAAAGCGT AGCCACGCAG ATGAAACCAT CATTCTTCTG GTTGAATGTT CAGCACGATG CGTTTTACGC GCAACAGAAT TTGAGCATTA GCAGTTTTCT GGTTGCCGCT TCAAAAACTG TTCCCATTGA CTTCATCTCT TCCCCTGAGG TGAATTTCTT TAGGAAAATT TCTGGTCGTT TCGGGCGTAA TGGACCTAGT CTTGTGTTCC GGTTTCTCGG TCAAGAAGAG TTCGAGCCAA CAACAAACAG AACCTACGGC TCTATCTTGA GTAACCTGAC TTTTGTCAAG ACTTTTGCTT CAGGGATCCT TGTTCCCAAG TCTTACATAT TGCCACTCGA TGACCAGCAG TACTTGCTTC CTCCTACATC CTTAGTTCAA GATGCTCACA AAGCAGGATT AGAAGTTTTT GTGTCAGGTT TTGCAAATGA TATTGATATT GCACATGACT ACAGTTTCGA TCCAGTCTCT GAGTATCTAT CTTTTGTGGA CAATGGCAAT TTCTCTGTCG ATGGTGTGCT CACTGATTTT CCTATATCTG CATCTGCATC CCTCGATTGC TTCTCCCACA TTGGCAGAAA CGCTACAAAA CAAGTGGATT TTCTTGTTAT ATCCAAAAAT GGTGCGAGTG GAGACTATCC TGGATGTACA GACTTGGCAT ATGAGAAGGC AATCAAAGAT GGTGCTGATG TAATCGATTG CTCGGTCCAA ATGTCCAGCG ACGGCACACC CATTTGCTTA AGTTCGATCG ATCTCGGGAA CAGCACAACA GTTGCCCTAA CTGCTTTCAG AAACCGTTCA ACAACTGTTC CTGAGTTGGG CTCACTTGGT GGAATATACA CTTTCAGTCT CACATGGCCT GAGATCCAGA CCTTGACTCC TGCTATTTCA AACCCCTACG GTGTATTCAG GCTGTTTAGG AATCCAAACC AGAAAAATGC TGGGAAGCTT TTTTCACTTT CTGATTTTTT AAACTTGGCA AAGAACTCCA CCTCTCTCTC CGGTGTTTTG ATCAGTGTAG AGAATGCGGC ATACCTGAGA GAGAATCAAG GGCTCGACGT TGTTAAAGCG GTTCTTGATA CACTCACACA GACTGGCTAC AGCAATAATA CAGCCACAAA GGTCATGATT CAGTCAACAA ACAGCTCAGT TCTAGTTGAC TTCAAGAAGC AGAGCAAGTA CGAGACTGTC TATAAAGTTG AAGAAAACAT CCGTGATATT CTCGACTCTG CTATTGAAGA CATAAAGAAA TTCGCTGATG CTGTTGTGAT CCAAAAATCA TCAGTCTTTC CTCTCGCTCA GTCGTTCATC ACAACGCAAA CCAATGTTGT GGAGAAGCTG CAGAAGTCTC AGCTCCCAGT TTATGTGGAA CTGTTTCAGA ATGAGTTTTT ATCTCAACCA TATGACTTCT TTGCTGATGC AACCGTTGAG ATAAACTCTT ATATCACTGG AGCCGGTATA AACGGAACCA TCACCGAGTT TCCTTTCACA GCTGCAAGAT ACAAAAGGAA TCTGTGTTTG GGAAGAAAAG AAACTATACC TTACATGGCC CCTGCCCAAC CCGGTGCCCT CTTAACCCTT GTGAGTCCTA CGTCCTTACC TCCAGCCCAA GCTCCAAGCC CGGTTTTCAT AGATGCTGAT GTCACTGAGC CACCACTACC TCCGGTTATA GCAAAAGCCC CAACCTCAAC CCCTGGAACC CCATCAACCA ATGCACAAGC ACCTAGTGGA CAAACCCGAA TCACTCTATC TGTTCTACTT TCCGTTTTTG CAATGGTTCT TGCCTCCCTT CTACTTCTGT GATCAACCCT TGATCTCATC TCCTATGTTG ATAATGTCTT CCGCCCTCGT AAGATTTCCC TGTGTGTGAC TCAGTCAAAT CTTAACAGCC AGAGCCATAA ATTTTTTCCG CTAGCGAGTC TTCGTGACAA CCTTCTGTTT ATTTGCAGTG ACGACTTCTC TATGCATGTT GTCTGCTTAT ATTCTAGTTC TGTCCAAAAA ACAACAGGTT ATTCTTTGAG TGTGACTTTC CCTCGGATTC ATTTGAGATA TTCATTTGTT GTTGTATCAT ATACTCTTAT AATATTTATG AGACTGTATC CTTTATAAAC AC |
| Length | 2672 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 6076525.. 6080128 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G26690.1 |
| Description | PLC-like phosphodiesterase family protein |
| TAIR curator summary | Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. |
| Alias | [GDPDL3][GPDL2][MRH5][SHV3][Glycerophosphodiester phosphodiesterase (GDPD) like 3][GLYCEROPHOSPHODIESTERASE-LIKE 2][MUTANT ROOT HAIR 5][SHAVEN 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg910662 | germin-like protein 5 |
| 8.24621 |
Ahg478515 | FASCICLIN-like arabinogalactan protein 18 precursor |
| 8.48528 |
Ahg493180 | arabinogalactan-protein family |
| 10.7703 |
Ahg356713 | 3-ketoacyl-CoA synthase 20 |
| 15.4919 |
Ahg490872 | arabinogalactan protein 18 |
| 15.5563 |
Ahg484603 | Peroxidase superfamily protein |
| 15.6525 |
Ahg479890 | Leucine-rich repeat protein kinase family protein |
| 16.0935 |
Ahg900167 | 3-ketoacyl-CoA synthase 10 |
| 16.2788 |
Ahg943148 | Cupredoxin superfamily protein |
| 16.7332 |
Ahg496244 | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|