Detail



ID : Ahg478024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478024|fgenesh2_kg.3__725__AT3G07050.1
Sequence
CCATCTTCCT TCTCCATAAA CCCTTTCTTC TAACCTACTC AGTTTTTCTT TTTGCGTCGC TCTCTTCCGC AGGCGAGAAA GATGGTGAAA CGGAGTAAAA AGAGTAAGAG TAAGAGGGTG ACCTTGAAGC AGAAGCATAA GGTCCTGAGA AAGGTGAAGG AGCACCACAA GAAGAAGGCA AAGGATGCTA AAAAGCTTGG GCTCCACCGT AAGCCAAGAG TAGAGAAGGA CCCAGGTATC CCCAATGACT GGCCTTTCAA GGAACAAGAG CTTAAGGCCC TTGAAGTTAG ACGTGCCCGT GCTCTCGAAG AGATTGAACA GAAGAAAGAA GCCCGCAAAG AAAGGGCTAA AAAGAGGAAA CTTGGTTTGG TTGATGATGA TGATACCAAG ACAGAAGAAG AGACCATAGA GGAGTTCACT AAAGTTGTCA ATGTTCGAGA TAACTCGGAG AGGGCTTTCT ACAAGGAGCT AGTTAAAGTT ATTGAATTGT CTGATGTCAT TTTGGAGGTT CTTGATGCCC GTGATCCTCT TGGCACTCGT TGTACCGACA TGGAGAGGAT GGTAATGCAA GCCGGTCCCA ATAAGCATCT TGTGTTGCTG CTGAACAAGA TTGATCTTGT TCCCCGAGAG GCTGCTGAGA AATGGCTTAA GTACCTTAGG GAAGAATTTC CAGCTGTTGC ATTCAAGTGT AGCACCCAGG AACAGAGATC AAACTTGGGT TGGAAATCAT CTAAGGCATC AAAACCAAGC AATATGTTGC AGACGAGTGA TTGTCTTGGA GCAGACACTC TTATCAAATT GTTGAAAAAC TACTCAAGAA GTCATGAGTT AAAAAAATCT ATTACAGTTG GTATTATTGG ACTGCCTAAT GTCGGCAAGA GTAGTCTTAT TAACAGTTTG AAGAGAGCGC ATGTTGTCAA TGTCGGTGCC ACTCCTGGAC TTACAAGGTC TCTGCAAGAG GTTCATTTAG ACAAAAACGT GAAGTTGCTG GATTGTCCTG GAGTTGTGAT GCTGAAATCA TCAGGAAATG ATGCTTCTAT AGCTCTCCGA AATTGTAAAA GAATTGAGAA GTTGGATGAC CCAGTCAGTC CAGTGAAGGA AATTCTCAAG CTTTGTCCAA CACAAATGCT GGTGACTCTC TACAAAATCC CGAGCTTCGA GGCAGTTGAT GATTTTCTTT ACAAAGTCGC CACTGTAAGG GGTAAGCTTA AAAAGGGTGG TCTTGTGGAT ATTGAAGCTG CTGCCAGAAT TGTTTTGCAT GACTGGAATG AAGGTAAAAT CCCATACTAT ACAATGCCGC CAAAGAGGGA CCAAGGTGGA CATGCAGAGT CAAAGATTGT GACCGAGCTG GCCAAGGATT TCAATATCGA TGAGGTTTAC AGTGGTGAAT CCTCTTTCAT TGGGAGCTTG AAGACGGTAA ACGAATTCAA CCCTGTTGAA GTTCCTTCAA ATGGTCCTCT CAATTTCGAT GAAACTATGA TCGAGGATGA GTCTAAGACT GAGACAGAAG AAGAGCCTGA GCATGACAGT GATGATGATG AGTCTATGGG AGGGGACGAG GAGGAAGAGG CAGGAAAGGC GAAGGAGAAA TCAGAGACGG GGAGGCAGAA CGTGAAGCTA TATGCAGCGG AAAACATGTT GAATACAAAA AAGCAGAAAG CAGAGAAGAA GAAGAGGAAG AAAGCAAAGA AAGCAGGAGG TGGTGAGGAG GATCTGATGG ACGGAGATTA TGATTTCAAA GTGGACTATA GGAAGAAGAA AGATGGAGAA GACGAAGAAT TCCAGATTGA GGCTAAAATT CCAATGGCTG GACTTTTGCC TGAAGAATGA GTG 
Length1833
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2782445.. 2785188
Download Sequence
A.thaliana
AGI-codeAT3G07050.1
DescriptionGTP-binding family protein
TAIR curator summary
Alias[NSN1][nucleostemin-like 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg492249 FtsJ-like methyltransferase family protein
3.4641 Ahg496396 DEAD box RNA helicase (PRH75)
4.12311 Ahg316209 CCAAT-binding factor
4.3589 Ahg474417 Ribosomal RNA processing Brix domain protein
4.58258 Ahg479365 P-loop containing nucleoside triphosphate hydrolases superfamily protein
5.47723 Ahg474037 nucleolin like 1
6.32456 Ahg496951
7.14143 Ahg939860 RNA-binding (RRM/RBD/RNP motifs) family protein
8.60233 Ahg477959 ARM repeat superfamily protein
9.38083 Ahg935276 Sas10/U3 ribonucleoprotein (Utp) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression