Detail



ID : Ahg496258

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496258|fgenesh2_kg.8__2074__AT5G61040.1
Sequence
AAGATAATGA AAAATAAAAC ACAGAGCCGT TCGTTTTGCT GATTCGATTG TACCAACTTC CGACAAAGAT TCCGATTGTT CGATTTCTTA TACCTTGAGC TTCTCCATTG GTTCATTGAT CATTTCTTGA AGCTACACAA GCAAGTTGCA AGTTGCAAAT TTCACCTAAA GGAAAGGGTA CACGTTGTTA CTGCTCCTCA CCTTATCCCT GACGGAAAAA TCAAAGCTTT CTCTGGGTTT TGCTCAGTAG TAATTCGATT TCCGCATAGT TTTGGTACAA AGTGGAGGGT TTGGGCATTG CTCTCGACCT GATTCCTGCG TTTTTAGGTC TCTCCTTGAG GTTGCTTGTG TTGAATTCGT TTGGGAATTT TCGATAGAGT TCTTGACAGT TAAAGCCCTG AGCTTTCAAC TTCGTTCATT GGATTGGTGT TTGAATTGGA ATGGAGAAGG AGAGATTTTA CTGTTATTTT TTGGGTTGCT CTCTTGATTC TTGAAGGCAA GAGAGGACGA AATGGATATT TGGTTAATCG CAGCTACTGC TGCTACGGGA TATATAGCTA AGCAATTGCA GAATGTAACC AAATGTAAAG ATAACGTTCT TGAATCTTCT TCTGAAGATG TGAAGCCAGA ATCTCCTCCT GGGTGCTTGC TTAGCAGATT GGTAAGAGTC AAGAATGCTA ATGAAAACAA ATTTGGGGAT GAGAAAATGA TATCGGATGG GGAAACTCTG GATGCATCTA CGAGTGGAGA GAATTCGGGA TATTACGAAG CTAACCGTTC AGATACTTTG TTCGGTTTGA TGCCCGAGTT CTCTGAGATG GAACATGGGA ATTGGAAAAC CAGTGCTACT CTTGCAGGTG ACACACAGTT GAATTCTTTA TTTAGGAGAA ACCAGCGGTT CAGGCGATTA GCCAAACCTT TGAGTTCGAT GGATAGCTGC TTAATGTCTC GGTTTCATAG AGAACAAATG ACCATGGAAG ATTACATGAC TAGCCCATTT CCATCGCCAC ACGCTTCAGT TTCAAGGCCA TTACTTGTGA CTGATGGTAC TCAAGTAATT AGCAAGAGCG CTGCAGATTC TTTGTGGCTG AGCCAACATG TTATTCTCAA TGAAGATAAC TCTACACAAA GTTGCGGAAT CCCCTGGTTG GATTCTTCGG TTGAGAGAAG GAGAAGAGTG GGAAATGAGA AGACCAAGAG TAGAAAACAT GGACAAGGTG ATGCAACAAT GTTGCTACAA ATCGGGATCT CGATTGGCAT CATATCCTCG TTCATGGCAA GCCAAGCCGA AGTGAGCAAA GTCAAACAAG AGCTGAAGCA AACAGAGAAC TTGGTGCATG ATTTAGAAGA TGAGCTTGAG ATGAAAGACT CGTTGATAGT GAAGGAGATA GATATTGAAA AGGCAGCTGA CAATTCAGAA TCTATAAGTA ATATTGAAGC AGAGCTTGAA GCTGAACTTG AAAGGCTAGA AATTAACATG AACTCCTCCA ACATTGAGAC AAGACTCTCT GATATGATAG AGATGGAGCC GGATTGTGAG GTAGAATTTG CACAGGGTGA ACTGAGAGCT GATCGGGTTA AAGGGAAGCG TTTAGATGAA ACTGAGTCCA ACCAAGACCC AAGTGGTAAC TCCACACCTG AGTCAGGAAA CTATGCTGTC TCACCTCGCG AATTGAGCTT GCGGTTGCAT AAAGTTATCA ATTCACGCCT TGAGAAACGG ATTGAAGAGC TCGAGACTGC ACTCCAAGAG AGCCAAAGAA AGGTGGAGCA GCTGGTCATG GAATCAGAGA GCAAGAAGAG GTCATGGTCA AGGTTATGGG AAACTCGTGA AGTGATGACA TATAAGAGTG ACTCGAATAT CCCAGTTGCT ATTGAGCACA CCAAGACTAA TCCTGCTGAG ATGCAACCGC TGGTTATGAA CTTAACTGGG GAAGCACTTG ATGCATTCAA TGAGTCTTAC GACGAATTGA TGAAAATAAA CGATGACTCG GAAGATGATG ATGATGGTGA TTCACCGTTA GAGATGCAAG AGAGCAGGAT TCACCAAGAA GATTTCTCTT CAACAAACAA AAGCTCACCT TGGAGCCATC AGAAGGACGA TTTCAAGGTG CAAGAGCAGG AACTGCTAGA CCTTATTGGT ATTGAAGACG AAGAAGAAGA AAGCAATGAC TTTGAGAGTG AAATGCAGAA GCAACTGATA AAGCAGATTG TTGAGAAAAC AAAACAAGGG TCTCCTGTTG TGTTGAATGC TCAGAAGATG CTATTTCTCA TGGAAGAAAC TGAACATAAT CTGTAACATT AGGCAGCATT AGAGTTTTGC GTGGATGGAA TTCTTAAGGT CTGGTTAGTG TGTAGACCAC AAGCAAAGTT GAAACAAAGC TCACTTTTTT TGTT 
Length2394
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18637777.. 18640473
Download Sequence
A.thaliana
AGI-codeAT5G61040.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg940448 nuclear matrix protein-related
10.9545 Ahg487232 3'-phosphoinositide-dependent protein kinase 1
12.49 Ahg943440 Tetratricopeptide repeat (TPR)-like superfamily protein
16.1245 Ahg497011 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
18 Ahg494424 protein dimerizations
25.632 Ahg358310 glycine-rich RNA-binding protein 3
27.2029 Ahg494464 RNAse THREE-like protein 3
27.55 Ahg332172 zinc finger protein-related
27.5681 Ahg924164 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
31.305 Ahg916255 Zinc knuckle (CCHC-type) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression