Detail



ID : Ahg332172

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332172|fgenesh1_pm.C_scaffold_8001515
Sequence
ATGCGGAACG ATGCGGCGGA GCCTAAATAC GCGACAGCTG AAATAGCGGT GTGGTGGGAC ATTGTGGACT GTCCGATTCC CGAGGGTTAT GAAGCTCATC GGGTCCGTCC GAGTATAGAA GGGGCGTTCA AGAAACTAGG CTACTCTGGT CCTGTCTCCA TCACTGCCTA TGGCGACCAA ACACAAACCC CTGATAATCT CCTGCGAGGG CTCTCTTCCA CTGGAGTCGA TGTTGCACAT ACCATTACCG AAAGCACATG CGCTCTCATG TATTCGGATA TGGTGGAATG GCGACGTCAT ATTCCTCCTC CGGCGACAAT GATGTTCATA TCCAATCAGG TGGACCATGT CTTCTCATTG GATCTGGCCC GGCTACAACA AGAGACGCAA TACAACCTCT TTCTGGCTTA CTCGGTTAGT TCTAAAGCCA TACCAGCTCT TGAGACTTCT GCAGAGTGGC GCTGGAACAA TTTACTAAAG TCGAAGACGA AGAAGACCAG AGTGGTTAAA ATATATGAAG AAGAAGAAAG TGACCGTGCC ATGTTTTATT GTAAATCGTG CGATTTCGAT TGCCAAAGCT TGAGGGAACT CAGGAAGCAT CTCTCGAGTA GATATCATGC AATGGGAGAA CTTTTATGCC CTACTGCTAC AGAAATTTCT CCTGTAACGA TGAAGTGGGG AAGGAACTTC CCGGCCAAGC CTGAATACGC CACAGCTAAA ATTCTGGTGT TGTGGGACAT TGTGGACTGT CCGATTCCCG AGGGTTATGA AGTTCATCGG GTCCGTCCGA GTATAGAAGG GGCGTTCAAG AAACTAGGCT ACTCTGGTCC TGTCTCCATC ACCGCCTATG GCGACCAATC ACAAACCCCT GATCATCTCC TGCGAGGGCT CTCTTCCACT GGAGTCGCTG TTTCACATGC CATTACCGAA GTCAGATACA GAAGAATGTT TTACGATTTG ATTCGATGGC AACACCTTAA TCCTCCTCCA GCTACAATCA TGCTCATATC CGATCATATA GAGGATTACT TCTCAACTTT TGTTGCCGGT CTTCAACAAT GTTGTATTAA ATATAAATAC AACATGTTCC TGGCTTATTC ATTTAGGCCT AACAAAATGT TAGCCCTCGT CACCTCTGCA GAGTGGCTCT GGGAAAGCTT ACTGGAAGGT GTTTATTTGT CCTCCTCTCT TTGTTCCACA GTTTCAGAGA CAAGAAGACA CGTTCTTCAA AGGTGCAGTA GTCAAACGGG TGAACCTGAA TCTACCAGAA TGTTTGATTG CGAAACGTGC CTTTTTGATT GCAAGAGCCT TGATGATTTC ATGAAGCATC TCTCAACTAA TGAACATGCA TGGGAAGTAA GCATTCTCTC TCAATACATT ATTTCATTTT TTCTAACCAT TTGA 
Length1404
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17640230.. 17641922
Download Sequence
A.thaliana
AGI-codeAT3G62850.1
Descriptionzinc finger protein-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg918788
7.07107 Ahg950619 Protein of unknown function (DUF295)
9.16515 Ahg899271 zinc finger protein-related
10 Ahg926001 lupeol synthase 2
10.3923 Ahg943724 Pentatricopeptide repeat (PPR-like) superfamily protein
14.6969 Ahg898845 thylakoid lumenal 17.9 kDa protein, chloroplast
20.347 Ahg495722 expansin A14
22.6274 Ahg355852 RNA-binding (RRM/RBD/RNP motifs) family protein
23.6643 Ahg485234 Sterile alpha motif (SAM) domain-containing protein
26.7582 Ahg496095 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression