Detail



ID : Ahg496336

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496336|fgenesh2_kg.8__2152__AT5G61690.1
Sequence
ATGATTTTGC AAGAAGGCTT GCCGCTTCTC TACCAGCAGT TCACGGCGTT GTTCGGGAAG AATCTATTGC TTTCATGGCG GAACAAGAGA GCCACGTGTC TTCAACTCTT CTCTTCATTC TTCTTCATCC TTGTCATCTT TTGTATAGAG GAAGCCATGA AGGCAAGCGA CGCATCCTCA ACAGCGTACA AGAATATCAC TGATCCTACA CTATTGGTTT CCCCACCGAT TCTTCCTTGT GAGGACAAGT TCTTTGTGAA GCTTCCTTGC TATGACTTCG TGTGGAGTGG GAACCATAGT CGCCGCGTTA CTGATATCGT CTCTGCAATT ATGGCTAACA ATCCAGGGAG ACCAATTCCA ACCAACAAGG TTCAATCGTT CAAGGAGCCT GATGAGGTAG ATGCATGGCT TCTGTCACAT CCCTTGCAAG TTCCAGGAGC TTTGCATTTT GTGGAAAGGA ATGCTTCAGT AATCAGCTAT GGTATTCAAA CAAATTCTTC CTCGGAGAGA AAACGTGGTC AGACTGAAGA TCCTACGTTT AAGTTTCTTG TTCCTCTTCA AGTCGCTGCA GAGCGTGAAA TCGCAAGGTC CTTAATTGGA GATCCAGATT TTGGTTGGGG TTTGGGATTT AAGGAATTTG CACGACCAGC TATTATAACT GAAACTACCT CTGCACTCTC AGTCATGGGA CCAGTGTTCT TCCTTGCTTT CTCCATGTTT GGTTTTGTTC TCCAACTCGG TTCCCTGGTT ACCGAGAAAG AGCTCAAACT TCGGCAGGCA ATGACAATGA TGGGTGTTTA TGATTCTGCA TATTGGTTGT CATGGCTCTT ATGGGAAGGA ATCCTTACTT TTGTCTCCTC ACTTTTATTG GTCCTCTTTG GAATGATATT CCGGTTTGAT TTTTTCTTGA AGAACAGTTT TGTTCTTGTC TTCCTACTTT TCTTGCTCTT TCAGTTTAAT ATGATTGGCC TAGCATTTGC GCTATCATCT ATTATTAGCA AATCATCTTC GGCAACAACC GTCGGTTTCC TTGTGTTTTT GATTGGTTTT ATAACACAGA TTGTATCAGC TACTGGATTC CCTTATTCCA GCGCTTATGC GGTTTCTCGT CGGGTGATGT GGTCTCTTTT TCCACCAAAC ACTTTTTCTG CGGGACTTAA GCTTCTTCTT GATGCAACCT CAACTCCCAA AAGCTCTGGA ATCAGTTGGA GTAATAGAGC CAACATTATC TACCAGTGGC TCCTTGGGAC ATTCCTATTC TGGTTTGTTC TGGCTATCTA CTTTGACAAT ATTATTCCCA ACTCGTCCGG TGTAAGAAAA CCGATCTTCT ACTTTTTAGC ACCTGGTTAT TGGACTGGCA AAGGGGGCAA CAAAGTGGAA GTTCCACCCG TGGAGCATAA TACGCCAGAT GACAAAGATG TGCTTGAAGA AGAGACAGAA GTTAAACAAC AAGCAATGGA TGGAATAGTT GATCCTAACA TTGCAGTTCA GATACATGGT CTTGCAAAGA CATATCCTGG GACTACAAAG CTTGGATGCT GCAAATGCAC CAAAACTTCG CCTTTTCATG CTGTAAAGGG TTTGTGGATG AATATTGCCA AAGATCAGTT GTTTTGTCTT CTTGGACCTA ATGGCGCGGG AAAAACAACT ACTATTAGTT GTTTGACTGG CATAAATCCA GTTACTGGTG GTGATGCTCT TATATATGGA GACTCCATAA GAAGTTCCGT GGGTATGTCT AACATTCGTA AAATGATAGG AGTGTGTCCT CAGTTTGATA TTCTTTGGGA TGCTTTGTCT AGTGAAGAAC ACCTCCACCT CTTTGCTAGC ATCAAAGGAT TGCCACCAGC ATCGATCAAA TCGACTGCTG AGAAGTTACT GGCGGATGTA AAACTGACAG GAGCTGCGAA AGTTAGAGCA GGAAGTTATA GTGGTGGAAT GAAACGTCGA CTCAGTGTTG CGGTAGCACT TATCGGTGAT CCCAAGCTGA CAACTGGCAT GGACCCTATC ACGAGGAGAC ATGTGTGGGA CATTATACAA GAGTCAAAGA AAGGTCGTGC CATCATACTA ACGACGCATT CTATGGAAGA AGCTGATATT TTAAGTGATC GAATAGGGAT CATGGCTAAA GGCAGGCTCC GCTGCATTGG GACCTCAATC AGGTTAAAAT CCCGCTTTGG TACAGGATTT GTTGCTAACG TTAGCTTCAT CGAAAGCAAA AATGACAATA ACATCGGTGT TGGAGCTTCG CACGAGCCAT TGAAGAAATT CTTTAAAGAG CATCTGAAAG TTGAGCCAAC AGAAGAAAAC AAAGCTTTCA TGACTTTTGT TATCCCACAC GACAAAGAAA ACCTTTTGAC GGGGTTTTTT GAGGAGCTAC AAAACAGAGA ATCTGAATTT GGAATCTCGG ACATCCAACT CGGTCTTGCG ACTCTTGAAG AAGTGTTTCT CAACATCGCA AGACAGGCTG AACTAGAAAG CGCAACAGCC GAAGGAAACA TGGTCACTCT GGAGTTAAAA TCAGGCATCT CACTAGAGAT ACCTGTGGGA GCAAGATTTG TTGGGATCCC TGATACAGAA AACGCAGAGA ATCCAAGTGG GGTAATGGTG GAAGTGTACT GGCAACAAGA CGGGTCGGGA TCGATGTGCA TCTCAGGACA CTCATCAGAG ATGCGGGTGC CACAGAATGT TCCGGTGACA CGTCCACCAT CGCCAGATGC ATTAGGACAT AAAGACCTAC GACAAGGGGT TCGTGGTGTC GTGATTGATT TATGA 
Length2775
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18921905.. 18926001
Download Sequence
A.thaliana
AGI-codeAT5G61690.1
DescriptionABC2 homolog 15
TAIR curator summarymember of ATH subfamily
Alias[ABCA11][ATATH15][ATH15][ATP-binding cassette A11][ARABIDOPSIS THALIANA ABC2 HOMOLOG 15][ABC2 homolog 15]
Gene coexpression
MR
MR Locus Description
25.0998 Ahg475609 photosystem II reaction center protein H
25.0998 Ahg475557 photosystem II reaction center protein H
29.3769 Ahg351609 Protein of Unknown Function (DUF239)
37.5766 Ahg483723 Arabidopsis thaliana protein of unknown function (DUF821)
57.3585 Ahg314403 C2H2 type zinc finger transcription factor family
59.8999 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
61.0164 Ahg931786 proline-rich extensin-like family protein
64.0156 Ahg484914 transposable element gene
64.0625 Ahg323992 hydroxyproline-rich glycoprotein
64.6529 Ahg901222 homeobox-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression