| Annotation |
|---|
| Description | jgi|Araly1|496619|fgenesh2_kg.8__2435__AT5G64200.1 |
| Sequence |
AGTAGATTCC ATTGTTTCAT AGACCTAATT TCACTTCTCC CAGTCTCTCC GCCGGCGGGA AAACTATGTC GCACTTCGGA AGGTCAGGTC CACCGGATAT CAGCGACACC TACTCGCTTC TCGTCCTTAA CATAACCTTC CGTACGACTG CTGATGATCT CTATCCTCTA TTCGCAAAGT ATGGAAAGGT CGTTGATGTC TTTATTCCCA GAGATCGAAG GACTGGTGAT TCGCGTGGTT TTGCGTTTGT TCGGTATAAG TATAAAGATG AAGCTCACAA AGCAGTGGAA AGGCTTGATG GAAGGGTTGT TGATGGCCGA GAGATAACTG TTCAGTTTGC GAAATATGGG CCAAATGCTG AAAAGATTTC CAAAGGAAGG GTTGTGGAAC CACCACCAAA GTCACGAAGA TCGAGAAGCC GTAGTCCTAG GAGGAGTCGT AGTCCTCGGA GGAGCCGAAG CCCGCCTAGA CGCCGTAGTC CTAGAAGAAG CCGTAGTCCT CGTAGGAGGT CCCGAGATGA TTACAGGGAA AAAGACTACC GGAAGAGGAG CAGGAGCAGA AGCTATGAGA GGCGTGAAAG GCATCAGGAG AAGGATAGAG ATCATCGTCG TCGAACTAGG TCTCGTAGTG CCAGCCTAGA TGACAAACGC AGAGTCAGAG GCCGTTATGA TGATGAGAGC CGCAGTCACA GTCGCTCCTT GAGTGCATCT CCTGCTCGCC GCAGCCTCAG CCCTAGAAGT TCCTCCCCAC AAAAAACCTC TCCTCCTAGA GAAGTTTCTC CTGATAAGCG TAGCAATGAG AGGTCTCCAT CTCCTCGTCG CAGCCTCAGC CCAAGAAGCC CATCTTTGCA AAAGGCCTCT CCTTCTAAGG AGGTGTCTCC TGAAAGGCGT AGCAATGAGA GGTCCCCGTC TCCTGGTAGC CCTTCTCCCC TGGGCAAAGT TGATGCTGCT TCTCGAAGTC AATCTCCTTA TGCTGCGGAA TGACTGCAGC CACTTGTGAA ATGAAAAACA CGTTTGCTTG TACTGATGAT GTTTCATCAT CAAGCACTGG AACGTCTACC CTCTGTAGTA TTACTTGCTT TCCTCTGGTT CGAGAAAAGA ATTGACTTGG AAGATGGCAC AACCATGTTG AGATTGTAGC TGTTGATGCT GTTTATGAAA CTGTAGATGA TCGATGCTGT TTATGAAACC GTAGATGTTC GATGCTGGTC ACAGCAATCT GCTTAAACTC CCCTTCTTGT TGCCCAATGC TTACTTAGAA GGGCCTGGCT CGTTTAGTTT TCAATCTAAG TTCAGTTGAG TTTCACTTAT CTCT |
| Length | 1314 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 20070083.. 20072487 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G64200.1 |
| Description | ortholog of human splicing factor SC35 |
| TAIR curator summary | encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks. |
| Alias | [At-SC35][ATSC35][SC35][ortholog of human splicing factor SC35][ARABIDOPSIS THALIANA ORTHOLOG OF HUMAN SPLICING FACTOR SC35] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg484088 | Ribophorin I |
| 4.58258 |
Ahg921888 | Nucleotidylyl transferase superfamily protein |
| 6.16441 |
Ahg477251 | Pre-mRNA-processing-splicing factor |
| 6.7082 |
Ahg478747 | SC35-like splicing factor 30A |
| 9.48683 |
Ahg355577 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain |
| 22.3607 |
Ahg943823 | HEAT repeat ;HECT-domain (ubiquitin-transferase) |
| 24.2487 |
Ahg941643 | TCP-1/cpn60 chaperonin family protein |
| 24.4949 |
Ahg495939 | regulatory particle triple-A ATPase 3 |
| 25.2982 |
Ahg920157 | eukaryotic release factor 1-2 |
| 27.8388 |
Ahg936093 | signal peptide peptidase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|