| Annotation |
|---|
| Description | jgi|Araly1|943823|scaffold_700052.1 |
| Sequence |
CTCGGGGTTT CTTCCTTTGT ATGGAAACTC GGAGCCGCAA GCGGGCGGAG GCGACCTCAG CTGCCCCATC TTCTTCTCCT TCTTCACCTC CCTCTGCCTC TGCTGGTCCC ACCACCCGCA GCAAACGCGC TCGTCTTTCT TCTTCTTCCT CACTTGCCCC TTCCTCCACC ACCCGCTCTC GTTCTTCTCG CTCTGCCGCC GCCACTGCTC CAGCTCCCAT GGACACCTCC ACTGACTCTT CTTCTGGATT TCGCCGAGGC GGTCGTGGTA ACAGGGGAAA CACCGATAAC ACCAACTCTG ACAAGGGTAA GGAGAAGGAA CATGACGTTA GGATTAGGGA CAGAGAAAGA GAAAGAGACC GAGCCAGAGA ACAACTCAAC ATGGATGCTG CTGCCGCCGC TGCTAGGAGC GCTGACGAGG ATGACGACAA TGACAGTGAG GATGGCAACG GCGGATTCAT GCATCCTAAC ATGAGCTCTG CCAGCAGTGC TTTACAAGGC TTGCTCAGGA AGCTTGGAGC TGGATTGGAT GACTTGCTTC CTTCTTCCGG TATCGGCTCT GCTTCATCTT CCCACTTGAA TGGAAGGATG AAGAAGATTC TCTCTGGCTT GCGCTCTGAA GGAGAAGAGG GAAAGCAGGT CGAGGCCTTA ACCCAGCTGT GTGAGATGTT ATCCATTGGA ACCGAAGACT CGCTAAGCAC CTTCTCTGTT GATTCCTTCG TGCCAGTTCT TGTGGGTCTA CTTAACCATG AAAGCAATCC CGACATTATG CTTCTTGCAG CCAGGGCTCT TACCCATCTA TGTGATGTCT TGCCGTCTTC TTGTGCTGCT GTTGTACATT ACGGGGCAGT TTCATGCTTA GTGGCTAGAT TGCTAACCAT TGAATACATG GACTTGGCGG AGCAGTCTCT GCAAGCTCTC AAAAAGATAT CTCAGGAGCA CCCAACTGCC TGTTTGCGAG CTGGCGCTCT TATGGCTGTG CTCTCGTATC TGGATTTCTT CTCCACTGGT GTTCAGCGCG TAGCACTATC TACTGCTGCA AACATGTGTA AGAAACTGCC TTCGGATGCA TCTGATTATG TTATGGAAGC TGTACCATTG CTGACAAACC TACTTCAGTA TCATGATGCG AAGGTTTTGG AATATGCTTC TATATGTCTG ACTCGGATTG CTGAAGCATT TGCACCGTAT CCTGAGAAAT TAGATGAATT ATGTAACCAT GGCCTGGTGA CGCAAGCTGC GTCTCTTATT TCCACGAGCA ATTCAGGAGG TGGGCAAGCA TCTCTTAGTG TGTCAACATA CACGGGGTTA ATCCGATTAC TTTCTACCTG TGCGAGTGGG TCACCTCTTG GATTCAGGAC ATTACTTCTT CTTGGTATTA GTAGCATTCT TAAGGATATT CTGTTGGGTT CTGGGGTCTC TGCTAATACA TCTGTATCCC CAGCACTGAG CCGGCCTGCA GATCAGATTT TTGAGATAGT CAACCTAGCG AATGAGCTAC TCCCTCCATT GCCAGAAGGA GTTATCTCTC TTCCTACTAG CACAAACGCT TTTGTGAAAG GTTCATGCCA AAAGAAATCT TGTCCAAGTA CTTCAGGAAA ACAAGAAGAT GCTCTAAAAA TTTCACCAAG AGAAAAATTA CTTGGTGATC AACCTGAACT TCTGCAGCAA TTTGGATTGG ATCTTCTTCC AGTTTTAGTG CAGATCTATG GTTCTAGTGT CAATGGTACT ATTCGCCATA AATGTCTCTC AGTCATCGGA AAGTTGATGT ATTTCAGCAG TTCAGAGATG ATTCAATCTC TAATTGGTGA CACAAATATT TCGAGCTTCT TGGCTGGTGT CTTGGCATGG AAAGACCCAC AGGTCTTGGT TCCTGCTCTA CAAGTTGCAG AGATATTGAT GGAAAAGCTT CCTGAAACAT TCTCGAAAGT GTTTGTGAGG GAAGGGGTGG TCCATGCTGT AGATCAACTT GTCTTGGTTG GTAAATCTTC TCATGCCTCA CCTACTGATA AGGACAATGA CTGTGTGCCC GGATCTGCAC GATCTAGGCG TTATAGACGG CGAAGTAGTA ATGCCAATTC CGATGGAAAC CAGTCGGAAG AGCCTAAGAA TTCTGCGTCC CTTAACATAG GTGCAAACCA TAATTCCCTG GATACTCCTA CAGCTAGCTT CATGCTAAGG GAAACAGTTA GTTCCTGTGC CAAAGCATTC AAAGACAAGT ACTTCCCGTC TGATGGTGGG GATCTTGATG TTGGAGTTAC AGATGATCTC TTACATCTGA AGAATCTTTG CACGAAGCTA ACTGCTGGTA TAGATGATCA TAAAGTGAAA GGGAAGGGAA AATCTAAAGC CTCTGGGCCA TGCCTTGGCG ATTTCTCTGC TAGCAAGGAA GAGTACTTGA TTGGTGTCAT TTCTGAGATA CTTGGCGAGC TAAGTAAAGG GGATGGTGTC TCAACTTTTG AGTTTATTGG CAGTGGTGTG GTTGCAGCAT TGCTTAACTA TTTTTCTTGT GGATACTTTT CCAAAGAGAA GATCTCCGAA CTTATATTGC CCAAACTTCG CCAGGAGGGA CTCAGAAGGT TCAAAGCTTT TCTAGAAGTC GCTCTTCCTT TTGATGGTAA TGAGGGAAAG GTCCCTCCTA TGACAGTTTT GATTCAGAAA CTTCAAAATG CTTTATCGTC ACTGGAACGC TTTCCCGTTG TCCTTAGCCA TCCCTCAAGG TCACTAAGTG GAAGTGCTCG GCTCTCCTCT GGATTGAGTG CTTTGGCACA TCCTTTAAAG TTGCGATTAT GCCGTGCACC TGGAGAGAAA ACACTACGTG ATTACTCCTC CAATATTGTA CTTATAGATC CATTGGCAAG CATAGCAGCG GTGGAGGAAT TTCTGTGGCC CCGAGTTCAA CGCAGTGAAT CTGCTCTGAA GCCGGCAGCG CCTGCTGGAA ATACAGAGCC AGGCACGTTA CCTAGCGGTG CTGGTGTTTC ATCACCATCT TCGTCAACTC CAGCTTCCAC CACTCGTCGT CATTCTTCTA GATCTCGATC GGCAATTAAC ATAGGTGATG CCTCAAAGAA AGATCCTGTG CCTGAGAAAG GTACCAGCTC ATCGAAAGGA AAAGGTAAAG GCGTTATGAA ACCGGCTCAG GCGGATAAGG GGCCTCAAAC AAGGAGCAGT GCTCAAAAGA GAGCTGTCCT TGACAAAGAT ACTCAAATGA AACCAGCTAG CGGAGACTCC AGTTCTGAGG ATGAGGAATT GGATATATCC CCAGTCGACA TTGATGATGC CTTGGTGATT GAAGAGGATG ACATTTCTGA TGATGAAGAT GATGATAATG AAGATGTTTT GGATGACAGT CTTCCCATGT GCACGCCTGA TAAAGTGCAT GATGTGAAAT TGGCGGACTC AGTGGATGAT GATGGTCTAG CAACCAGTGG CCGACAAATG AATCCAGCTT CTGGAGGCAC TAGTGGAGCA GCAGCAGCAC GGGGATCTGA TTCTACTGAT ACTGGCATTG GGAATTCTTA TGGTTCTAGG GGTGCACTCT CCTTTGCTGC TGCAGCGATG GCTGGGCTTG GAGCTGCCAG TGGTAGAGGT ATCAGGGGAA GTAGGGACTT GCATGGACGT ACCCTAAATC GAAGTTCAGA TGAGCCCTCT AAGTTGATAT TTACTGCGGG AGGAAAGCAA CTTAGTAGGC ATTTGACGAT TTATCAGGCT GTACAGCGAC AACTTATGCT AGATGAAGAT GATGATGACA GGTTTGGTGG CAGTGATCTA ATCTCAAGTG ATGGAAGCAG ATTCAATGAT ATTTACACCA TCATGTACCA GAGGCCAGAT AGCCAAGTGA ATAGGTTGTC TGTTGGTGGA GCAAGTTCTA CCACACCGTC AAAATCCACG AAATCTGCTA CTACTACCAA TTCCAGTGTA GAATCTCAGT CACATAGGGC ATCTCTTTTG GATAGTATCT TACAAGGGGA GCTTCCATGC GACCTTGAGA AGTCGAATTC TACATATAAT GTTCTGGCAC TGTTACGTGT ATTAGAGGGT TTAAATCAGC TTTGCCCTCG TTTAAGAGCC CAAACTCTTT CCGATCGTTT TGCAGAGGGT AAAATTACAA GTCTAGATGA TCTGAGTACA ACTGCTGCTA AGGTTCCTCA TGAAGAATTC GTCAATAGCA AACTTACACC CAAATTAGCT CGACAAATCC AGGATGCGCT TGCTTTGTGC AGTGGAAGTC TTCCCTCTTG GTGCTACCAG TTGACTAGAG CATGCCCATT TCTATTCCCG TTTCAAACCC GGAGACAGTA TTTCTACTCA ACTGCTTTTG GGTTGTCTCG TGCATTGAAT CGTTTGCAGC AGCAGCAAGG TGCTGACGGC AGTGGGTCTA CAAATGAACG AGAGATGAGA ATAGGGAGAT TGCAGCGCCA GAAAGTCCGT GTATCCCGAA ATAGGATATT AGATTCTGCT GCGAAAGTTA TGGAGATGTA TTCTAGCCAG AAAGCTGTTC TTGAAGTAGA ATATTTTGGT GAAGTTGGTA CTGGTCTAGG ACCTACCCTT GAGTTTTACA CACTTTTAAG CCATGATCTG CAAAAGGTTT CCCTAGGGAT GTGGAGATCA AGTTCTGGTG ACAAGGTATC TATGCAAATT GATAGAGATG AGATTGAAGA TGGAAAATCA TCTGCAGCTA ACAGAGATAT AGTTCTGGCA CCACTTGGGT TGTTTCCTCG ACCTTGGCCC TCAACAGCTG ACATATCTGA AGGTGGTCAG TTTCATAAAG TCATTGAATA TTTCCGCCTT TTAGGGCGTG TGATGGCCAA AGCACTTCAA GATGGACGGC TATTGGACGT CCCATTGAGT ACAGCGTTTT ATAAACTTAT TCTTGGTCAA GAGCTTGATT TGCATGATAT TGTATTATTT GACGCTGAAC TTGGCAAGAC CTTGCAAGAG CTGCGTGTTC TCGTTGCCCG CAAGCACTAT CTGGAGGCAG TAGGTGGTGA CAATAGCAGC ACGGTTTCTG ATTTATGTTT ACGTGGATCC CGAATAGAAG ATCTCTTCTT GGACTTCACG CTACCTGGCT ATCCTGAGTA CATTCTGAGA TCAGGAGATG AAATTGTTGA TATTACTAAT CTTGAGGAGT ATATATCCCT TGTCGTTGAG GCTACTGTGA AGAGAGGAGT CACTCGGCAG ATCGAAGCCT TCAGATCTGG ATTCAATCAG GTGTTTGACA TAACATCTCT ACAAATATTC ACCCCTTCTG AGCTGGACTA CTTGCTGTGT GGTCGTAGAG AGTTGTGGGA GGTGGAGACT CTTGCTGAAC ATATCAAATT TGATCACGGT TACACTGCCA AAAGTCCGGC AATCATTAAC TTACTGGAGA TCATGGGAGA ACTTACAGCA GATCAGCAGA GGGCTTTCTG CCAATTTGTA ACTGGAGCTC CTAGGCTTCC TCCTGGTGGC TTAGCTGTTC TGAACCCAAA GCTCACGATT GTAAGAAAGC ACTCATCGAC CTCAAGTGCA GCAGCCAATG GAGCAGGGGC TTCGGAGACA GCAGATGATG ATTTGCCCAG TGTCATGACT TGCGCAAACT ACCTTAAACT CCCTCCTTAT TCTACAAAGG AAATAATGTA CAAGAAACTG CTCTACGCCA TCAACGAAGG GCAAGGATCG TTTGACCTCT CATAAGCAAC AGATGGCTCT GTTTCC |
| Length | 5696 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 159340.. 167291 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G38600.1 |
| Description | HEAT repeat ;HECT-domain (ubiquitin-transferase) |
| TAIR curator summary | encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. |
| Alias | [KAK][UPL3][KAKTUS][UBIQUITIN-PROTEIN LIGASE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg903021 | auxin transport protein (BIG) |
| 2.82843 |
Ahg491448 | Sec23/Sec24 protein transport family protein |
| 3.16228 |
Ahg340908 | glucan synthase-like 10 |
| 3.4641 |
Ahg491024 | phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases |
| 3.60555 |
Ahg951082 | BAH domain ;TFIIS helical bundle-like domain |
| 4.89898 |
Ahg943470 | cullin 1 |
| 4.89898 |
Ahg478309 | cell division cycle 48 |
| 5.19615 |
Ahg327182 | KH domain-containing protein |
| 6 |
Ahg494809 | Ubiquitin-like superfamily protein |
| 6 |
Ahg495156 | CLPC homologue 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|