Detail



ID : Ahg496691

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496691|fgenesh2_kg.8__2507__AT5G64760.1
Sequence
CGGAGTATTG ATTCCCGGCG TTTAGCAATG GAAGAAAGTA AACAACTCGA ATCGTCGATT GATAGGCTTC TGAACGAAGA GAAGCAGATG AGGCTCGCGG AAAATGTCGC CGGAACTAGA AAAGCAGCTA CCGAGATTCT GAAGCTTTGT TTCGAAGCTA AGGATTGGAA ACTTCTCAAC GAACAGATTT TGAATCTCTC CAAGAAACGT GGTCAGCTTA AGCAGGCTGT ACAATCCATG GTGCAACAAG CAATGCAGTA TATTGATCAG ACACCGGATA TCGAAACTCG GGTTGAGCTT ATTAAGACCT TACTCAACGT ATCTGCTGGA AAGATATATG TCGAAATCGA GAGAGCTCGT TTGACCAAGA AGCTTGCTAA GATTAAGGAA GAACAAGGTT TGATTGCTGA AGCTGCAGAT CTTATGCAAG AAGTTGCTGT GGAGACATTT GGTGCCATGG CAAAAACTGA GAAAATTGCT TTCATCCTTG AACAAGTCCG CTTGTGTTTG GATCGACGAG ATTTTGTCCG TGCACAAATT TTATCTAGGA AGATCAACCC AAGAGTGTTT GATGCAGACA CCAAGAAAGA GAAAAAGAAA CCTAAGGAAG GTGATAACAT GGTAGAGGAG GCTCCAGCTG ATATACCAAC ATTGTTGGAG CTAAAGCGAA TTTACTATGA GCTCATGATT CGGTATTATT CTCACAACAA TGAGTACATT GAGATATGCC GTAGCTACAA GGCGATATAT GATATTCCTT CGGTAAAGGA AAACCCAGAA CAATGGATTC CAGTCCTGAG GAAGATCTGC TGGTTTTTGG CCTTGGCACC ACATGATCCG ATGCAATCGA GCCTGCTTAA TGCAACCTTA GAAGATAAAA AATTATCAGA GATTCCTGAT TTCAAGATGC TTCTAAAACA GATTGTTACA ATGGAGGTGA TTCAGTGGAC ATCTCTCTGG AATAAATACA AGGACGAATT TGAGAGTGAG AAAAACATGA TTGGAGGCTC TTTGGGTGAC AAAGCTGGTG AAGATCTCAA ACTAAGAATA ATCGAACACA ATATTCTCGT CGTCTCAAAG TATTATTCAA GGATTACCTT AAAGAGACTT GCAGAACTTT TATGCCTAAC CACTGAGGAA GCAGAGAAGC ATCTATCTGA AATGGTTGTG TCCAAAGCCT TGATAGCAAA AATCGACAGA CCATCCGGAA TAATCTGCTT CCAGATTGTT AAAGACAGCA ACGAAATTCT CAACTCGTGG GCAACAAACT TGGAGAAGCT TTTGGATCTT GTTGAAAAGA GTTGTCACCA GATTCACAAA GAAACAATGG TTCATAAAGC TGCACTAAGA GCTTGAGAAG CCTGTTTAGC CACACACA 
Length1378
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20341410.. 20343806
Download Sequence
A.thaliana
AGI-codeAT5G64760.1
Descriptionregulatory particle non-ATPase subunit 5B
TAIR curator summaryEncodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous genes RPN5a.
Alias[RPN5B][regulatory particle non-ATPase subunit 5B]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg472693 glycine-rich protein
9.32738 Ahg928584 plastid transcriptionally active 13
12.8062 Ahg495266 Transducin/WD40 repeat-like superfamily protein
13.4164 Ahg487667 Nucleotidylyl transferase superfamily protein
17.8885 Ahg313993 LOB domain-containing protein 4
19.975 Ahg941266 peroxin 19-2
20.7123 Ahg918728 mago nashi family protein
21.9773 Ahg314862
22.7596 Ahg929675 nuclear RNA polymerase D2B
22.9129 Ahg949661 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression