Detail



ID : Ahg496791

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496791|fgenesh2_kg.8__2607__AT5G65590.1
Sequence
CTCTCCTCTC CTACTTTACT TATTTCCTAT TCAAAGCAAG AAATCGAAAA AGGACCTCAA ACTTTTTTTC TATCCTTCAT TTTTCTCTCC TCCCATCATC ATCACCATGT CCTCCCATAC CAATCTCCCC TCTCCCAAAC CAGTTCCTAA ACCGGATCAC CGTATCTCCG GTACATCCCA AACCAAGAAA CCACCGTCTT CCTCCGTCGC TCAAGACCAA CAAAACCTAA AATGCCCTCG CTGCAACTCT CCAAACACAA AGTTCTGTTA CTACAACAAC TACAGTCTCT CTCAGCCTCG TCACTTCTGC AAATCTTGTC GCCGTTACTG GACACGTGGC GGCGCTTTAA GAAACGTTCC CATCGGTGGT GGTTGCCGGA AAACCAAAAA ATCCATCAAA CCTAACTCCT CCCTGAACAC ACTTCCTTCG TCTTCTTCTT CTCAGAGGTT CTTCTCTTCA ATCATGGAAG ATTCATCCAA ATTCTTCCCT CCTCCGACAA CAATGGATTT TCAGCTCGCT GGCTTATCTC TCAACAAAAT GAACGATCTT CAACTTTTGA ATAACCAAGA AGTTCTTGAT CTTAGGCCCA TGATCTCCTC GGGTCGAGAA AACACACCCG TTGATGTCGG GTCGGGTTTA TCCTTAATGG GTTTCGGAGA TTACAACAAC AACCATTCAC CGACGGCTTT CACAACCGCC GGAGCAAGCG ACGGGAACTT AGCTTCTTCC ATAGAGACTT TGAGTTGTTT AAACCAAGAT TTACACTGGA GGCTTCAGCA ACAGAGGATG GCGATGCTTT TTGGTAATTC TAAGGAAGAA ACTGTTGTTG TGGAGAGGCC ACAACCTATT CTTTATCGGA ATCTTGAGAT CGTGAACTCA TCATCGCCGT CGTCTCCGAC GAAGAAAGGA GATAATCAGA CAGAGTGGTA TTTTGGTAAT AATAGTGATA ATGAAGGAGT GATTAGTAAT AATGCTAATA CAGGAGGAGG AAGTGAATGG AACAATGGAA TTCAAGCTTG GGCTGATCTT AATCATTATA ATGCTTTGCC TTGATTCTTG GTAAGTTTAA GAAACTATAT AATCTATAAT TTTATATATG TGTTGTGATG TAATGCCAAA ACTATTTATG TTTGTAGTTT TTTCTTTTTG GGGTGTTCTT TTCGTTGTCG TTGTTGGTTT AGTACTTTAA GTTTCAATTT GTAAACAAAA AAACAAAATT GGGGGAGATA TTCAAGAATG GAGAGAGATA CTTACATAAT ATATTCTATA TATTTGTGAT TTGTCTAAGT TGGAACAGAA TTTACTGTGT TTAATTATTG AAAAGCTCTT GGTTTGATGG TGAAATGTTC ACTTAATGAC TTATTGGATG 
Length1370
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20670480.. 20671895
Download Sequence
A.thaliana
AGI-codeAT5G65590.1
DescriptionDof-type zinc finger DNA-binding family protein
TAIR curator summary
Alias[SCAP1][STOMATAL CARPENTER 1]
Gene coexpression
MR
MR Locus Description
15.9687 Ahg334132 Aluminium activated malate transporter family protein
34.4238 Ahg927887 MATE efflux family protein
39.8999 Ahg351609 Protein of Unknown Function (DUF239)
56.2139 Ahg925744
63.4035 Ahg481664 transposable element gene
69.7567 Ahg338146 KNOX/ELK homeobox transcription factor
78.3326 Ahg949069 transposable element gene
83.7257 Ahg943128
84.8292 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
87.4128 Ahg494865 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression