| Annotation |
|---|
| Description | jgi|Araly1|496842|fgenesh2_kg.8__2658__AT5G67530.1 |
| Sequence |
GAAGAAGTAA ACAATGGGGA AGAAACAACA CAGCAAAGAT CGGATGTTCA TAACGAAGAC GGAGTGGGCA ACAGAATGGG GAGGCGCTAA ATCCAAAGAG AATCGTACTC CTTTCAAGAG TCTTCCTTAC TATTGCTGCG CGCTTACGTT TTTGCCATTC GAAGATCCTG TGTGTACAAT CGACGGGAGT GTTTTCGAGA TAACAACTAT AGTGCCTTAC ATTCGGAAAT TTGGGAAGCA TCCAGTTACA GGAGCTCCAT TGAAAGGAGA AGATCTAATT CCTCTCATCT TTCACAAGAA CTCTGAAGGA GAGTATCATT GTCCTGTTCT AAACAAAGTC TTTACTGAAT TTACACATAT AGTTGCTGTC AAGACTACCG GAAATGTATT CTGCTACGAG GCAATCAAAG AGTTAAATAT CAAAACCAAG AATTGGAAGG AGCTTTTAAC AGAAGAACCA TTCACAAGAG CCGACCTTAT AACAATTCAG AATCCTAATG CAGTTGACAG TAAAGTGACG GTGGAGTTTG ATCATGTTAA AAATGGCCTT AAGATCGATG ATGAAGAGTT GAAAAAGATG AACTCAGACC CAGCTTATAA TATAAACGTG TCTGGAGATA TCAAGCAGAT GCTTGCGGAT CTTGGAACCG AAAAAGCTAA AGAGATTGCT TTACATGGTG GAGGTGGAAA CAAGGCACGT AATGAAAGGG CCGCTGCTAT TGCTGCGATT CTAGAGTCTA GATCGAAAAT CAAAGAGGAT TCTAAAGCAG AACAACCGAA GCAGACCTAC AGTGTTGTGG ATGCTGCATC TGCTTCGGTT TTTGGAAGAA GTGCTGATGC AGCTAAAGCT GGTTCTAGTG ATAAAACAGC TGCAAGAATA GCTATGCATA TGGCTGGAGA TAGAGCACCT GTTAATTCTA AAATGGTGAA GAGCCGTTAT TCGTCGGGTG CTGCTTCTCG TTCTTTCACT TCCACTGCAT TTACTCCTGT AACTGAAAAC GATTTTGAAC TAATTAAAGT CGAGAAAAAC CCAAAAAAGA AAGGGTATGT TCAGTTTCAG ACAACACATG GTGATTTGAA CATAGAGCTC CATTGCGATA TAGCTCCTAG AGCATGTGAG AATTTCATCA CTCTTTGCGA ACGTGGTTAC TACAATGGAG TGCCCTTTCA CAGAAGCATC AGGAACTTCA TGATTCAAGG TGGCGATCCA ACTGGGACAG GAAAAGGAGG TGAATCCATC TGGGGGAAGC CATTCAAAGA CGAGCCGAAC TCGAAGCTAC TTCACTCGGG AAGAGGCGTA GTTAGTATGG CTAATAGTGG TCCTCACACA AATGGTTCTC AGTTTTTCAT CTTATACAAA TCTGCAACCC ATTTAAACTA CAAGCACACA GTGTTTGGTG GAGTTGTTGG AGGTTTGGCA ACACTAGCAG CAATGGAGAA TGTACCTGTA GATGAAAGCG ACCGTCCTCT GGAAGAGATT AAGATAATCG AGGCAAATGT GTTTGTGAAT CCATACACGG AGCCTGATGA AGAGGAAGAA AAAGAGAAAG CTGAGAAAGA GAGGAATGAA GACAAAGACA TTGAGAAGGT CGGGTCGTGG TACAGCAACC CGGGATCAGG AACAGCTGAA GGTGGAGCCG GTGGCGGTGG TGTCGGAAAA TACTTGAAAG CCAAGAGTAG TACAGCCACT AAAGACACTA ATGGTTCCCT AGACTCTGAT ATTTCAACCA TTGGAGTTAC TAAGAAAAGA AAAACTACTG CGTCAGCCTC CACAGGGTTT AAAGATTTCT CGAGCTGGTA ATTGAAAACA TTCTCTACCT ACTTTGTAAA ACTGTTGACT AGTTTTGATA GAGCCCAAGT CACAAAAGCA TTTGTATGCC AACATTGAAC CTTTGATGTC CAAAAGCTGG AGCTGTGTAA TAAAGCTTCT TCAGTAAAAG ATTTATTATA GAGTATAATC CT |
| Length | 1962 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 20902958.. 20905803 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G67530.1 |
| Description | plant U-box 49 |
| TAIR curator summary | |
| Alias | [ATPUB49][PUB49][PLANT U-BOX 49][plant U-box 49] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.2111 |
Ahg938645 | ABA-responsive element binding protein 3 |
| 7.34847 |
Ahg481634 | OTU-like cysteine protease family protein |
| 9.38083 |
Ahg472067 | Calcineurin-like metallo-phosphoesterase superfamily protein |
| 11.3137 |
Ahg494108 | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein |
| 15.1658 |
Ahg481550 | ARM repeat superfamily protein |
| 15.2971 |
Ahg475153 | Chaperone DnaJ-domain superfamily protein |
| 15.748 |
Ahg487067 | ubiquitin-protein ligase 4 |
| 16.7332 |
Ahg484401 | Melibiase family protein |
| 19 |
Ahg470606 | cell division cycle protein 48-related / CDC48-related |
| 19.3649 |
Ahg486758 | Late embryogenesis abundant protein (LEA) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|