Detail



ID : Ahg887876

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887876|Al_scaffold_0048_9
Sequence
GACGAGAAAT GGAAGACGCC GTCGCTGTAC ATCCACTTTT TTTCCCGTCA ACAGACGGAA TATTCCTCCA CCGGATTTCA CTACTGCGGC GTTTACGATG GCCATGGCTG TTCCCATGTA GCGATGAGAT GCAGAGAAAG ACTACACGAG CTAGTCCGTG AAGAGTTTGA AGCTGATGCT GACTGGGAAA AGTCAATGGC GCGTAGCTTC ACGCGCATGG ACATGGAGGT TGTTGCGTTG AACGCCGATG GTGCGGCGAA ATGCCGTTGC GAGCTTCAGC GGCCGGACTG TGACGCGGTG GGATCCACCG CGGTTGTGTC TGTTCTCACG CCGGAGAAAA TCATCGTGGC AAATTGCGGT GACTCACGCG CCGTTCTGTG CCGTAACGGG AAGGCCATTG CTTTATCCTC CGATCATAAG CCCGACCGTC CGGACGAGCT AGACCGGATT CAAGCAGCGG GTGGTCGGGT TATCTACTGG GATGGCCCAC GTGTCCTTGG AGTACTTGCA ATGTCACGAG CCATTGATAA TTACTTGAAA CCGTATGTAA TCAGCAAACC GGAGGTAACC GTGACAGACC GGGCCAACGG AGACGATTTC CTTATTCTAG CAAGTGACGG TCTTTGGGAC GTTGTTTCAA ACGAAACTGC ATGTAGCGTC GTTCGAATGT GTTTGAGAGG AAAAGTCAAT GGTCAACTAT CATCCTCACC GGAAATGGAA ATGACAGGTC TCGGCGCCGG GAATGTGGTG GTCGGAGGAG GAGATTTGCC GGATAAAGCG TGTGAGGAGG CTTCGCTGTT GCTGACGAGG CTTGCATTGG CTAGACAAAG TTCGGACAAC GTAAGTGTTG TGGTGGTTGA TCTTAGACGA GACACGTAG 
Length879
Protein Sequence
Protein Residue
Map Locationscaffold_48: 72866.. 74315
Download Sequence
A.thaliana
AGI-codeAT5G59220.1
Descriptionhighly ABA-induced PP2C gene 1
TAIR curator summary
Alias[HAI1][SAG113][highly ABA-induced PP2C gene 1][senescence associated gene 113]
Gene coexpression
MR
MR Locus Description
1 Ahg496034 highly ABA-induced PP2C gene 1
3.16228 Ahg474395 Late embryogenesis abundant protein (LEA) family protein
5.74456 Ahg939699
9 Ahg929605 Late embryogenesis abundant protein (LEA) family protein
12.1655 Ahg927823
13.784 Ahg496427 HVA22 homologue B
15.4919 Ahg492058 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
16.7332 Ahg325294 Late Embryogenesis Abundant 4-5
20.9762 Ahg926219 ABI five binding protein
21.4942 Ahg950321 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression