Detail



ID : Ahg889064

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|889064|Al_scaffold_0007_1050
Sequence
ATGGTAGTAG TAACAAAGAA GACGATGATG ATTCAACTTC ATCTCCTCTA CTTGCTCTGT TTCCTCTGTT TTTCTACTCC TACTCTCTCT TCTGAGCCCA GAAACCCTGA AGTTGAGGCG TTGATAAGTA TAAAGAACGA TTTGCATGAT CCTCATGGAG CTTTGAACAA TTGGGACGAG TTTTCAGTTG ATCCTTGTAG CTGGGCTATG ATCACTTGCT CTCCCGACTA CCTCGTCATT GGACTGGGAG CGCCGAGCCA GTCTCTCTCG GGAAGTTTAT CTGGGTCAAT CGGAAATCTC ACTAATCTCC GACAAGTGTC ATTGCAAAAT AACAACATCT CCGGCAAAAT TCCACCGGAG ATTGCTTTTC TACCCAAATT ACAAACCTTG GATCTTTCCA ACAACCGATT CTCCGGTGAC ATCCCTGTTT CCGTTGAGCA GCTAAGCAGC CTTCAATATC TGAGACTCAA CAACAACTCT CTGTCTGGGC CCTTCCCTGC TTCTTTGTCC CAAATCCCTC ACCTCTCCTT CTTGGACTTG TCTTACAACA ATCTCAGTGG CCCTGTTCCT AAATTCCCAG CCAGGACTTT CAATGTTGCT GGTAATCCTT TGATTTGTAG AAACAGTCCA CCTGAGATTT GTTCTGGATC AATCAATGCA AGTCCTCTTT CTGTTTCTTT GAGCTCTTCA TCAGGACGCA GGTCTAATAG ATTGGCGATA GCTCTTGGTG TAAGCCTTGG CTTTGTTGTT ATACTACTCC TTGCTCTCGG GTCCTTTCTT TGGTACCGAA AGAAACAAAG AAGGCTACTG ATCCTTAACT TAAACGATAA ACAAGAGGAA GGGCTTCAAG GACTTGGGAA TCTAAGAAGC TTCACATTCA GAGAACTCCA TGTTTCTACA GATGGTTTCA GTTCCAAGAA CATTCTCGGC GCTGGAGGAT TCGGTAATGT GTACAGAGGA AAGCTTGGAG ACGGGACAAT GGTGGCAGTG AAACGGTTGA AGGATATTAA CGGAACCTCA GGGGATTCAC AGTTTCGTAT GGAGCTAGAG ATGATTAGCT TAGCTGTTCA TAAGAATCTG CTTCGGTTAA TTGGTTATTG CGCAACTTCT GGTGAAAGAC TTCTTGTTTA CCCTTACATG CCTAATGGAA GCGTCGCCTC TAAGCTTAAA TCTAAACCGG CATTGGACTG GAACATGAGG AAGAGGATAG CAATTGGTGC AGCCAGAGGT TTGTTGTATC TACATGAGCA ATGTGATCCC AAGATCATTC ACAGAGATGT AAAGGCAGCT AATATTCTCT TAGACGAGTG CTTTGAAGCT GTTGTTGGTG ACTTTGGACT CGCAAAGCTC CTTAACCACG CAGATTCTCA TGTCACAACG GCAGTTCGTG GTACGGTTGG CCACATTGCA CCCGAATATC TCTCCACCGG TCAGTCTTCT GAGAAAACCG ATGTGTTTGG GTTCGGTATA CTCTTGCTCG AGCTCATAAC TGGAATGAGA GCTCTTGAGT TTGGTAAAAC CGTTAGCCAG AAAGGAGCTA TGCTTGAATG GGTGAGGAAA TTGCACGAAG AGATGAAAGT AGAGGAACTG GTGGACCGAG AACTCGGGAC AAACTACGAT AAGATTGAAG TTGGAGAGAT GTTGCAAGTG GCTTTGCTAT GCACACAATA TCTTCCGGCT CATCGTCCTA AAATGTCTGA AGTGGTTTTG ATGCTTGAAG GCGATGGATT AGCGGAGAGA TGGGCTGCTT CGCATAACCA TTCACATTTC TACCATGCCA ATATCTCTTT CAAGACAATA TCTTCTCTGT CTACTACTTC TGTCTCAAGG CTTGACGCAC ATTGCAATGA CCCAACTTAT CAAATGTTTG GATCTTCGGC TTTCGATGAT GACGATGATC ATCAGCCTTT AGATTCATTC GCCATGGAAC TATCCGGTCC AAGATAA 
Length1947
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4445256.. 4448090
Download Sequence
A.thaliana
AGI-codeAT4G30520.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias[SARK][SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE]
Gene coexpression
MR
MR Locus Description
10.1489 Ahg485395
20.5913 Ahg490488 TRAF-like family protein
22.4499 Ahg928996 Homeodomain-like superfamily protein
22.4499 Ahg934404 conserved peptide upstream open reading frame 52
22.9129 Ahg484766 chromatin remodeling 38
25.8457 Ahg492401 phosphoglucan, water dikinase
27.1293 Ahg470074 secretory 1A
27.2397 Ahg496559 Leucine-rich repeat protein kinase family protein
27.6586 Ahg491899 indole-3-acetic acid inducible 11
33 Ahg895882 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression