| Annotation |
|---|
| Description | jgi|Araly1|889976|Al_scaffold_0007_1962 |
| Sequence |
ATGATATTTG CTTGCTTGAA ATTTGCAGAG ACTAATCGAA TCGCCATGGC TAAGAGTTCC TTCAAGATCT CTAACCCTCT CGAGGCAAGA ATGAGTGAAT CTTCTCGAAT CAGAGAGAAG TACCCTGACA GAATTCCCGT GATTGTGGAA AAGGCTGGAC AAAGTGATGT TCCTGACATT GACAAGAAGA AGTATCTTGT ACCAGCAGAT CTAACAGTTG GACAATTTGT ATATGTGGTT CGCAAAAGAA TCAAGCTTGG AGCTGAGAAA GCTATCTTTG TCTTTGTTAA GAACACATTG CCTCCAACTG CTGCATTGAT GTCTGCAATC TATGAAGAAC ACAAAGATGA AGATGGGTTC CTCTACATGA CTTACAGTGG AGAGAACACT TTTGGATTCT TTACCGTTGC TTGA |
| Length | 414 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 8285185.. 8286191 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G21980.2 |
| Description | Ubiquitin-like superfamily protein |
| TAIR curator summary | Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Highest expression in flowers. mRNA abundance increased during dark-induced carbon starvation. Predominantly cytoplasmic with or without N starvation. Upon concanamycin A the protein accumulates in the central vacuole as punctuate structures that resemble autophagic bodies. This localization is more abundant upon N starvation. |
| Alias | [APG8A][ATG8A][AUTOPHAGY 8A][AUTOPHAGY-RELATED 8A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 25.8844 |
Ahg492573 | non-yellowing 1 |
| 26.3439 |
Ahg927863 | cytochrome P450, family 87, subfamily A, polypeptide 9 |
| 26.3818 |
Ahg921751 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
| 49.0408 |
Ahg482026 | OSBP(oxysterol binding protein)-related protein 1A |
| 49.7795 |
Ahg950030 | homogentisate 1,2-dioxygenase |
| 50.4381 |
Ahg947314 | cationic amino acid transporter 3 |
| 53.8052 |
Ahg494627 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
| 68.2935 |
Ahg915427 | Disease resistance protein (TIR-NBS-LRR class) family |
| 69.0217 |
Ahg934176 | |
| 72.1873 |
Ahg483158 | PLAC8 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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