Detail



ID : Ahg890100

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890100|Al_scaffold_0007_2086
Sequence
ATGGCGGGTG AGGAGAAGCA GACTCTTACT CCAAAGGAGA TTATACATCA GAAGTTTGGT GTTAAAGCAA TTTATAGAAT TGAGGAAGTT CATGTTTCTT CGAATGAATG CCTCTATCGT TGCCACTTGC AGCTACCAGA ATTTTCTGTT GTATCAAATG TTTTCAAGAG AAAGAAGGAT TCCGAACAAT CCGCTGCAGA ATTGGCTCTC GAGAAGCTAG GAATTCAGCC TCAGGATGAT GATGATGATG ATATAACTGT GGATGAAGCT TGGAATGATA TCGTTGAACG CATTAAGTAT ATATTTTCTG ATGAGTTCCT TTCAGCTGAT CATCCTCTGG GAGGTCATCT TAGGGCGGCA TTGCAAAGGG ATGGTGAACG TTGCGGATCA CTTCCTGTTT CTGTCATTGC GACATTTGAT GCAAAGATTA ACAGTCGCTG TAAAGTGATT GATCCTTCTG TGGACTCAGA TCCTATCTTG CTCATGTCCT ATGTCATGAA GGCTGCAGCA AAGTTGCCGG ACTACATTGT CGTGTCTCCG CATGTAGATT CACTACGAAG GAAAAAACCA TACCCTCCAG CAATTATAAA AGCTCTGGCT ACTCATGTGA AAAGCATAAA AGTTGAGGCT GTGCATATAC AATGTACTGT TGGCGGTGAA GAAGTTGTTA AGCCAGTCAC TCTTGATATT TCATCAGGTC GGTATTACTT GGATATTATT GCTGAAAAGC TTGGGTTGAA GGATGGCAGC CAAGTGATGA TATCAAGGAC TATTGGCAAA ACTTCCTCTG GCTATGAGTG TAGAGTATAC GCTGCCATGC CTAAGTTGAA GTCTTTCGAT AATTCATGGA AAGCCCGTGA AAAACGTCCA ATTAATGAAT CATCACATCT TGAAAAGTCT CGGAATGCAA AAGCAAGTTT TGTTTGTGGT CTTGATGTTC ACGGTGATGC GATTGTGGCA TCTGTTGGTT ACCCATGGAG GATATGTTGC GGTATGTCTC CTAATGGAAT CTATAAACTA TCCCGAGAAG CAATAATTGC TGCGCAGTTG CCTTTTTCAT TCACTACAAA GTCTACTTGG AGAGGTCCAT TCCCCAGGGA GATTCTCTGC ATGTTCTGCC GTCAGCAACA ACTAGCAGAA CCCATTTTTA CTTTATCTAC TGCTCCTGTG AAACCAATGT CTTGCATATT AAGATCCTAC CAGAAGTTGA AAGACTCTGA ATCTGATGAT AGCGAATATC AATATGTGAG CAAGGGAAAA GAGGAGATAC CAGAATCAGG GACTGGATAT AGATGTGAAG TGAAAATTCT CTCAAAGTCC CAGGATTTGG TTTTAGATTG CTCGTCGAAA AAGTTCTATG AGAAGGAAAA CCATGCTATT CAAAATGCTT CATTGGATGC CCTCTCATGG TTAAGTAGGC TTTTCGACGA GGGGGATGTG GACCCACTGC AACCATGTTA TACAAGTGAA CACCTGGATA TGGTATTTCA ACAGAGGATC TTGATGAAAG AGGCTGTTCC AAGGGGACAT TTCCGAAATA GAGACGAAAG GAATGAATAT GAGGACCAAA TTCGTATTCA ATCCATAACA AAGGGTTCCT TGGTTATCAT ATGCTATTCT GTGTATTTGG ATGTAGATGC TGATTTTTCG AGTGATGGTA AATCTAGAAA AGAACTCATC GAAAGCAATG AAGAGATAGA GTTCGAGGTG GGGAATGGTT CTATGAATCC ACATCTTGAA TCAGTTGTTA CTCAGCTGGC TGTGGGCCAA TATGCTCGTT TTTTAACTGA TGCGCCTGCT GAAGACTTGT TTGTGACTGC TGCCACTGGA ACCCAGAGAG ATCGTTCAGA TATCGCAGGT TTTGAATACT GTGTACGTTT GTTGGGAGTG AAAGGGCCAA CAGAAAAACG AATTGAGGCG GATTTTTTCA AACCTTCACT TTCAAAACAG CGTCTTGAAT ATGCAGTGAA ACATATAAAA GAATCGTCAG CTTCTACTCT GGTTGACTTT GGATGTGGAT CTGGAAGTTT ACTAGCCTCT TTACTTGACC ATCCAACTTC ACTTCAAACC ATTGCTGGCG TTGACATCTC ACAGAAGGGT CTTGTCCGTG CTGCTAAGGT CATTGAACAC ATGGAGGAAG ATCAAGCCTG TCAATTCGGG AAAACAGTTC TAAGCTTGTT TCGCCCGAAA CTTCTCATTG TCTCCACACC AAACATCGAG TACAACAAAA ATTTCCACAA GTCTGCTCCT CCAAACCACC TAAAAAACAG TTCCATGTCA CAGCTACCTA AATTCAGGAA CCAAGACCAC AAGTTCGAAT GGACAAGGAA ACAGTTTAAG CAGTGGGCAT CTAAGCTCGC TAAACGCCAT AACTACAGCG TCTACTTTAG CGGTGTTGGT GAGTCTGGTA AAGCAGATCC CGGGTTTGCT TCTCAGATTG CTGTTTTCAG ACGGAAATCT TTGTCCAACG TTGTGGAGAA GGTCTCAGAA GGCTCGATGC AGCCTTATAA AGTCATATGG GAATGGTCAA GAGGAAATGG AGACAAAAAG ACTAATCTTT CATAA 
Length2565
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8911932.. 8915896
Download Sequence
A.thaliana
AGI-codeAT4G20920.1
Descriptiondouble-stranded RNA-binding domain (DsRBD)-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.78233 Ahg935117 alpha/beta-Hydrolases superfamily protein
12.9228 Ahg355947 Tetratricopeptide repeat (TPR)-like superfamily protein
21.587 Ahg934838 Integrase-type DNA-binding superfamily protein
26.4575 Ahg343136 UDP-glycosyltransferase 73B4
28.4605 Ahg924476
30.8869 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
35.9166 Ahg493617 DENN (AEX-3) domain-containing protein
37.8153 Ahg942018
41.6893 Ahg490342 sucrose synthase 3
45.9565 Ahg910238 callose synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression