| Annotation |
|---|
| Description | jgi|Araly1|910238|Al_scaffold_0001_492 |
| Sequence |
ATGACGTGGC AATTTTTATT GACTGTTGGT AGTCTTGGAG AGGCTATGCT TGATAGTGAA GTGGTTCCAT CTTCTTTAGT TGAGATTGCT CCGATTCTTC GTGTTGCTAA TGAAGTTGAA GCTAGTAATC CCCGAGTTGC TTACCTATGT CGTTTCTACG CATTTGAGAA GGCGCATAGG CTTGATCCAA CTTCAAGTGG TCGTGGTGTT CGCCAGTTTA AGACTGCGCT TCTTCAACGA TTAGAAAGGG AGAATGAAAC AACTTTGGCA GGAAGGCAAA AGAGTGATGC ACGTGAAATG CAGAGTTTCT ACCAACACTA CTACAAGAAA TACATCCAAG CTTTGCTGAA CGCTGCGGAT AAAGCTGACC GTGCTCAACT TACAAAGGCC TATCAAACTG CTGCTGTTCT CTTTGAAGTC TTGAAGGCTG TTAATCAAAC AGAAGATGTG GAAGTGGCTG ATGAGATTTT GGAAACGCAC AATAAGGTCG AAGAGAAGAC CCAGATTTAC GTGCCTTACA ATATACTCCC CCTTGACCCT GATAGTCAGA ATCAGGCTAT AATGAGATTG CCTGAGATAC AAGCTGCTGT TGCCGCTCTT AGAAACACAA GGGGCTTACC ATGGACAGCT GGTCACAAGA AGAAACTGGA CGAAGACATT CTAGACTGGC TTCAGTCTAT GTTTGGTTTT CAGAAAGATA ATGTTTCGAA TCAAAGAGAG CACTTGATCT TGTTGCTTGC TAATGTCCAC ATCCGACAAT TTCCAAAACC TGATCAACAA CCAAAGTTGG ATGATCGTGC CTTGACCATA GTGATGAAGA AAATTTTCAG AAACTACAAA AAGTGGTGCA AATATTTGGG TCGGAAAAGC AGCCTTTGGT TACCTACTAT TCAACAAGAG GTACAGCAGC GTAAATTGCT CTACATGGGA CTTTATCTAT TAATATGGGG AGAAGCTGCA AACCTGAGAT TCATGCCAGA ATGCCTCTGT TATATATATC ACCATATGGC TTTCGAGCTG TATGGTATGT TGGCCGGTAG TGTTAGTCCC ATGACAGGGG AGCATGTAAA GCCAGCTTAT GGTGGTGACG ATGAGGCTTT CCTGCAGAAA GTAGTGACTC CTATATACCA GACAATAGCA AAGGAAGCAA AGAGAAGTAG AGGAGGAAAG TCAAAGCATT CTGTGTGGAG AAACTATGAT GACTTGAATG AATATTTTTG GTCAATTCGA TGTTTCCGCC TAGGGTGGCC TATGCGGGCC GATGCTGACT TCTTTTGTCA TACAGCTGAA GAACTTCGAA TTGAGAGAAG TGAGATAAAA TCAAACAGTG GAGATCGGTG GATGGGCAAA GTCAATTTTG TAGAGATACG CTCCTTCTGG CATATATTTC GAAGTTTTGA TAGAATGTGG AGCTTTTATA TCCTGTGTTT GCAGGCAATG ATTGTTAGTG CATGGAATGG ATCCGGAGAG TTGAGTGCCA TCTTTCAGGG TGATGTCTTC CTAAAGGTTT TGAGCGTCTT CATTACAGCA GCTGTACTAA AGCTTGCACA AGCTGTCCTT GACATAGCCC TCAGCTGGAA GGCAAGACAT AGCATGTCAC TCTATGTGAA ACTCAGATAC GTCATGAAGG TTGGTGCAGC TGCAGTATGG GTTGTGGTCA TGCCAGTTAC TTACGCGTAC AGCTGGAAAA ACGCTTCTGG TTTTGCTCTG ACAATAAAGA ATTGGTTTGG AGGACACAGC CATAATTCAC CTTCCCTTTT CATAGTGGCG ATTCTTATCT ACTTATCCCC GAACATGCTT TCTGCGTTGC TGTTTTTATT TCCATTCATT CGGCGTTATC TTGAAAGGTC TGACTTTAAG ATAATGATGC TGATGATGTG GTGGTCTCAG CCTCGTCTGT ATATAGGAAG GGGTATGCAT GAGAGCGCTT TGTCACTTTT CAAGTACACA ATGTTTTGGA TCGTGCTGCT GATTTCAAAG CTGGCATTCA GTTATTACGC TGAGATTAAG CCCCTTGTTG GTCCAACCAA AGATATAATG CGAATCCATA TATCCGTCTA CAGCTGGCAT GAGTTTTTCC CTCATGCCAA GAATAATATA GGCGTCGTCA TCGCGCTCTG GTCACCAGTT ATTCTCGTTT ATTTCATGGA CACTCAAATA TGGTATGCTA TAGTTTCAAC TCTGGTTGGA GGTTTAAATG GAGCTTTCCG CCGTCTTGGA GAGATCCGAA CACTTGGAAT GTTGAGGTCG AGATTTCAGT CCATACCAGG GGCCTTTAAT GATTGCTTGG TACCACATGA TAAGAGCGAG GATAAAAAGA AAAAGGGATT TAGGGCGACC TTCTCTCGCA AGTTTGATCA GCTCCCATCT AGTAAAGACA AGGAAGCAGC GCGGTTTGCT CAGATGTGGA ACAAAATCAT CAGTAGTTTC CGAGAAGAGG ACTTGATCAG TGATAGGGAA ATGGAGCTTT TGCTTGTCCC ATATTGGTCT GACCCTGATT TGGATCTTAT CCGGTGGCCA CCTTTTCTAC TGGCTAGTAA GATCCCAATA GCTTTGGATA TGGCTAAAGA CAGCAATGGA AAAGACCGTG AACTGAAAAA GAGATTGGCT GTTGACAGCT ACATGACTTG TGCAGTTAGA GAGTGCTATG CCTCTTTTAA GAATCTCATT AATTATTTGG TTGTCGGAGA ACGAGAGGGA CAGGTCATAA ACGACATATT CTCCAAGATT GATGAACATA TTGAGAAAGA AACACTGATA ACAGAATTGA ACCTGAGTGC TCTTCCTGAT CTGTATGGCC AGTTTGTTCG GCTAATCGAA TATTTGCTAG AAAACAGGGA GGAGGACAAG GATCAAATTG TAATTGTCTT GCTGAACATG TTAGAAGTGG TGACTAGAGA CATCATGGAA GAAGAAGTCC CAAGCTTACT AGAGACTGCC CACAATGGAT CTTATGTCAA GTATGACGTC ATGACTCCTC TTCATCAACA GCGCAAATAT TTCAGCCAAC TTCGATTCCC AGTTTACTCT CAAACAGAAG CTTGGAAAGA AAAAGCAAGT CTCTTCCATT TATCTCATTC TTGTTTTCAC CACAGTGGTG CATTTGATCT CTTTGGCATG AGGAATATTA AGAGGCTTCA TCTTTTGCTT ACTGTCAAGG AGTCAGCTAT GGATGTTCCT TCCAACTTGG AAGCTCGAAG GCGTCTTACT TTCTTTTCAA ATTCACTATT CATGGACATG CCTGCTGCAC CCAAGATCCG CAACATGCTT TCCTTCTCGG TCCTTACCCC ATACTTTTCA GAGGATGTTC TTTTCTCCAT ATTTGGATTA GAACAGCAAA ATGAAGATGG AGTTTCTATA CTCTTTTACT TGCAGAAGAT CTTCCCAGAT GAATGGACAA ACTTTCTGGA ACGAGTTAAA TGTGGCAGCG AAGAAGAACT AAGAGCAAGA GAGGATTTGG AAGAGGAGCT TCGTCTCTGG GCATCTTACA GAGGTCAAAC TCTGACTAAA ACTGTGCGAG GCATGATGTA TTACCGAAAG GCTTTGGAAC TTCAGGCCTT CCTTGATATG GCAAAGGATG AAGAATTATT GAAAGGCTAC AAGGCTCTCG AGTTAACCAG TGAAGAAGCA TCAAAGAGCG GAGGGTCACT CTGGGCGCAA TGTCAAGCAC TTGCGGATAT GAAGTTCACC TTTGTGGTTT CTTGCCAACA ATACAGTATT CATAAGAGAT CGGGCGACCA ACGCGCTAAA GACATATTGA GACTTATGAC AACGTATCCG TCTATTCGTG TTGCCTATAT TGATGAGGTA GAGAAAACAC ATAAAGAAAG TTATAAGGGG ACAGAGGAGA AAATTTATTA CTCAGCTCTT GTGAAAGCTG CTCCACAGAC CAAACCAATG GATTCTTCTG AATCTGTTCA AACACTAGAT CAGCTCATTT ATCGGATTAA GCTTCCGGGA CCGGCTATAC TAGGAGAGGG AAAGCCGGAA AATCAGAACC ATGCTATAAT TTTTACCCGC GGAGAAGGGT TGCAGACAAT AGACATGAAC CAGGACAACT ACATGGAGGA AGCTTTCAAA ATGAGGAACT TGCTGCAAGA GTTTCTTGAA AAGCATGGAG GCGTAAGATG TCCTACAATT CTCGGTCTTA GAGAGCATAT TTTCACTGGA AGTGTGTCTT CTCTTGCATG GTTTATGTCA AATCAAGAGA ACAGCTTTGT AACGATTGGG CAAAGGGTGC TAGCTAGTCC CTTGAAAGTA CGATTCCATT ACGGACATCC AGATATTTTT GATCGTCTGT TTCACCTTAC CAGAGGTGGT ATCTGCAAAG CTTCTAAAGT CATCAATCTT AGTTTTAATT CTACTCTGCG TGAAGGAAAT GTGACTCATC ATGAATATAT ACAAGTTGGT AAAGGGAGAG ATGTGGGCCT CAACCAGATC TCAATGTTTG AAGCAAAAAT CGCAAATGGA AATGGGGAGC AAACTTTGAG TCGCGACCTT TATAGACTGG GACACCGATT TGATTTCTTC CGAATGCTGT CTTGTTATTT CACCACAATT GGGTTCTACT TTAGTACCAT GTTAACCGTG CTTACGGTGT ATGTGTTTCT TTATGGACGG CTATATCTAG TACTTAGTGG GCTTGAAGAA GGATTGAGCA ACCAACGAGC TTTTCGTAAC AACAAGCCTC TTGAGGCAGC TCTTGCTTCT CAATCATTTG TGCAGATTGG TTTTTTGATG GCTTTGCCTA TGATGATGGA GATTGGACTT GAGAGGGGGT TCCATAACGC ATTGATCGAG TTTGTGCTGA TGCAGTTACA ACTTGCTTCC GTCTTTTTCA CTTTCCAGCT CGGGACAAAA ACACATTACT ACGGAAGGAC ATTGTTTCAT GGAGGCGCAG AGTATAGAGG AACTGGGCGC GGGTTTGTGG TCTTCCATGC GAAATTTGCT GAGAACTATA GGTTCTATTC CCGTAGTCAC TTTGTGAAGG GCATTGAGCT TATGATTCTT CTACTTGTAT ATCAGATCTT TGGTCAATCA TATAGGGGTG TGGTTACTTA TATTCTGATA ACTGTTTCAA TATGGTTCAT GGTGGTGACA TGGCTCTTTG CTCCTTTCCT TTTCAACCCG TCTGGTTTCG AGTGGCAAAA GATTGTTGAT GACTGGACAG ACTGGAACAA ATGGATATAT AACCGAGGAG GAATCGGTGT CCCTCCTGAG AAGAGTTGGG AATCTTGGTG GGAGAAAGAA TTAGAACATC TTAGACATTC AGGGGTTCGT GGTATCATCC TTGAGATCTT TTTGGCCTTG CGCTTCTTCA TCTTTCAATA CGGACTAGTG TATCATCTCA GTACCTTTAA AGGAAAAAAT CAAAGCTTTT GGGTTTATGG AGCGTCATGG TTTGTGATCT TATTCATTCT ACTGATTGTG AAGGGTTTGG GCGTTGGAAG GCGAAGATTT AGCACGACTT TCCAACTTCT ATTCAGAATC ATAAAGGGTC TTGTGTTCCT CACATTTGTG GCAATTCTCA TAACTTTCCT CGCACTTCCT CTGATAACAA TCAAAGACTT ATTCATATGC ATGCTTGCCT TCATGCCAAC TGGATGGGGA ATGCTTCTCA TTGCACAAGC GTGTAAGCCT CTGATCCTAC AGCTAGGGAT ATGGTCATCA GTTAGGACGC TAGCTCGAGG CTACGAGATC GTGATGGGCT TGCTTCTATT CACACCAGTT GCGTTTTTGG CTTGGTTTCC TTTTGTGTCT GAGTTTCAGA CAAGAATGCT CTTTAACCAA GCTTTTAGTA GAGGACTACA AATATCTCGT ATTCTTGGTG GTCAAAGAAA AGACCGGTCC TCCAAAAACA AGGAGTAA |
| Length | 5868 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 1860270.. 1870891 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G05570.1 |
| Description | callose synthase 1 |
| TAIR curator summary | Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48. |
| Alias | [ATGSL06][ATGSL6][CALS1][GSL06][GSL6][callose synthase 1][GLUCAN SYNTHASE-LIKE 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.245 |
Ahg496297 | CCT motif -containing response regulator protein |
| 6.9282 |
Ahg355042 | pleckstrin homology (PH) domain-containing protein |
| 9.11043 |
Ahg496672 | O-fucosyltransferase family protein |
| 9.79796 |
Ahg484766 | chromatin remodeling 38 |
| 10.198 |
Ahg488867 | Peptidase M28 family protein |
| 10.247 |
Ahg491493 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 10.6771 |
Ahg356828 | cold regulated gene 27 |
| 11.6189 |
Ahg493617 | DENN (AEX-3) domain-containing protein |
| 12 |
Ahg470934 | MALE GAMETOPHYTE DEFECTIVE 2 |
| 14.2829 |
Ahg471447 | ARM repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|