Detail



ID : Ahg495573

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495573|fgenesh2_kg.8__1389__AT5G54910.1
Sequence
ATGGTAAAAC TTAAGAAGAC CAAGGGAATG CGGAAGCAGA TTCGTCTCAA CGAAGTCGAA GAAATAAATC TTCTAAACCA GTGGATCGAA TCACAAAAAC CGGATTCAGG ATCCAATCCA CTTTCATTAC GTCCTCTTCC TAAAGATTCG AAGATAGGAA AGTTCGAAGA CGGCAAAAAC GGCACCGTTT TCTCGCGGTA CGCAGGTGTA AGGAAGTTTG CTCAGTTACC GATATCGGAT AAAACAAAAA GAGGATTGAA AGATGCGAAA TACGTTGACA TGACTGATGT TCAGAGGGCT GCTATTCCTC ATGCTTTATG TGGAAGAGAT ATTCTCGGTG CTGCTAGAAC TGGCTCTGGC AAAACTCTAG CTTTTGTTAT TCCGATTCTG GAGAAGTTAC ATAGGGAGAG ATGGAGTCCG GAAGATGGAG TGGGATGCAT AATTATATCT CCAACAAGGG AATTGGCAGC TCAAACTTTC AGTGTTTTGA ATAAAGTAGG AAAGTTTCAT AAGTTTAGTG CGGGGCTCTT AATTGGTGGT CGTGAAGGAG TTGACGTTGA GAAGGAGCGA GTTAACGAGA TGAATATTTT GGTATGTGCT CCTGGTAGGC TTCTTCAGCA TATGGATGAG ACCCCAAACT TCGAATGTTC ACATCTTCAG ATTCTGATTT TAGATGAGGC CGACCGTGTT CTTGATTCTG CGTTCAAGGG GCAGTTGGAT CCTATAATCT CACAGTTGCC GAAGCACAGA CAAACTTTGC TTTTCTCTGC AACCCAAACT AAGAAAGTCA AGGATCTAGC AAGACTCAGT TTGAGAGATC CTGAGTACAT TAGTGTACAT GAAGAGGCGC TTACAGCTAC TCCAGCTTCC TTGATGCAGA CTGTGATGAT TGTCCCAGTT GAAAAGAAAT TAGACATGCT ATGGAGCTTC ATCAAAACTC ACCTTAATTC CAGGATTCTT GTTTTTCTCT CCACCAAGAA ACAGGTCAAA TTTGTTCATG AAGCATTCAA CAAGCTCCGG CCTGGAATAC CTTTGAAGAG CCTTCATGGA AAAATGAGTC AGGAGAAAAG GATGGGAGTG TACTCTCAGT TCATTGAGAG ACAATCAGTT CTGTTCTGTA CCGATGTTCT TGCCAGAGGT CTTGATTTTG ATAAGGCTGT GGACTGGGTT GTTCAGGTGG ATTGTCCTGA AGATGTAGCT TCTTATATTC ACCGAGTTGG GCGTACAGCT CGTTTCTATA CTCAAGGGAA GTCGCTCCTC TTTCTGACAC CTTCAGAGGA AAAAATGATT GAGAAATTAC AAGAAGCTAA AGTGCCTGTA AAACTCATCA AGGCAAACAA CCAAAGGTTG CAGGAGGTTT CTAGGCTTTT GGCTGCTTTG TTAGTCAAGT ATCCAGATCT TCAAGGTGTT GCTCAGAGAG CCTTCATCAC ATATTTGAGG TCCATCCACA AAAGAAGAGA TAAAGAGATT TTTGATGTGT CAAAGCTGTC CATTGAAAAC TTTTCTGCTT CACTTGGTCT GCCAATGACT CCAAGAATCC GATTCACAAA CCTTAAAACG AAGAAAAAGG GGGTCTTTGA GAGTTCTATC GCTATGGAGC CTGAGAATGC ACAGGAATAT GAAGCACCTC TGGTTGTAAA AAAAGATCTT CTTGGTGAAG ATTTAGAGGA AGAAGATTTT GCTCTCAAGC CACGTGGAGA GGGAAAAGAA GTAGAAAAAT CAACCAAGGA AGAAGAAGTT CCCATACAAG GAACTCGGGT TTTGAAAAAC AAGAAGCTGA AGATCAATCT ACACAGACCA TTTGGGTCGA GGGTTGTGCT TGATGAGGAA GGCAATTCTT TGGCTCCCTT AGCAAGTGTA GCTGCTGCAG CAGGGACTGA AGTAGCCCTT GATGAAGAGA AAAGGAAGGA TTTCTATAAG AAAGTGGGAG CGGAAATGAG GAAAGCTGAT GCGGTCGACA AGAAAGTAGA GAGGGAAAAG AGGAGGGAAA AGAGAATGAA ACAGAAGATT AAGAGGAAGA GAGGAGCCAT GGAGGATGAA GAAGAAGAAG AAGAAGAAGA AGAAGGCCAT GATGGTTCTG GATCATCAGC TGAAGAAACA GGAAGAAACC GCAAAAGAGC AAAGAAGATC ATCTCTGACA ATGAAGAAAA TGAAGGAAAA ATCAACACAG ATTCTCTTTC CGTAGCTGAG CTTGAAGAAA TGGCTCTCAA ATTTATAACG CAATGATAAG ATCTCAATAG ACATTTTAAA TTTATATCAA TTCTGTGGAA AATTTTGTGA TTCGTTTCCA CCT 
Length2293
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15802264.. 15805392
Download Sequence
A.thaliana
AGI-codeAT5G54910.1
DescriptionDEA(D/H)-box RNA helicase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg488768 TCP-1/cpn60 chaperonin family protein
3.16228 Ahg481009 RNA-binding (RRM/RBD/RNP motifs) family protein
4.58258 Ahg924090 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
4.89898 Ahg890214 nucleotide binding;nucleic acid binding;RNA binding
6.08276 Ahg927059 Tetratricopeptide repeat (TPR)-like superfamily protein
7.4162 Ahg945561 AT hook motif DNA-binding family protein
7.48331 Ahg891152 aconitase 3
8.30662 Ahg475156 DNA-binding storekeeper protein-related transcriptional regulator
8.48528 Ahg938428 tonneau family protein
9.8995 Ahg330506 GTP binding;GTP binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression