| Annotation |
|---|
| Description | jgi|Araly1|491627|fgenesh2_kg.7__1060__AT4G31160.1 |
| Sequence |
AATTTCTATT TTTTTTTCCG CGATCCCAAC GTCTGAATTG ATCGTCGTTT CTGGGTTTTT CTTTGAAAAG AGAGGTATCT ATGGACGGGC AAGAGCATGC CGAGGTCCCT AATCAGATGG TTGAGGATGA ACAATCGGTT GTTGCGGCGG AGGCAATTAC AGAGTTGGCG AATTCAAATA ACGAAGCTAA TCCTGAAGAA GGAGGACAAC AGGAAGGAGA AGAACAGAGT GTGGAGGACG AGCTTATAGC GAAGGCGCAG AAGCTTATGG ATGATATTAC TTCCGTTGCT AATAACCCTA ATCCTAATTT CCTTCACGCT CTTAGTCATC TTCTCGAATC TCAGGAGTCT CTGTTCTTAG AGGAGAATGG GCATTTCTCC AATGCTCGCG GTAGTCATAA CAGTGGCAAG CTGTGTACTC TCATCCGAGA AAATGATGAG TTTTTTGAAT TGATATCGTC AACTTTTCTA TCTGAGAATT CTTACTCAAC CGCCGTAAAG GCAGCCTCTG CAAGATTGCT AATGAACTGT TCGCTTACTT GGATGTATCC TCATGTTTTC GACGATGCTG TTACGGAAAA CTTTAAAAAT TGGGTTATGG AAGAAGCAGT CAAGTTTCCT GGTGAAGACT CTGGCAGGAA GGAAGCCTCA GATTCTGAAA TGTTAAAGAC TTATTCTACA GGACTTCTTG CTCTCTCTCT CGCCAGTCGT GGGCAAATAG TTGAAGACGT TTTGACATCA GGACTATCTG CTAAGCTTAT GCATTATCTT CGAGTACGAG TTATTGGAGA GCCAAGCACA AGCCGTAGAG ATGCCCTTCA CACAACTGAG ACTAAGCATG TGTCCTTAAA AACAAAAGAA GAAGGTCGGA GTAGGGTGCG TAAGGTTGTG GATACAGTTG AAGGTGACCA TGTTTTTGAG ATGGACTCTG GCAGAGAGAT GGGACAAACT GATGTACAGT CTGATGGTGA ATTCGAAATC GATGGCAGAG AAATATTTAA TGTTTCAGGT GTTGTTGATT GTAAAATTAA ACCTGGAGAT GACAATAGTG GAAGAGATGA CCCTTCAAGA CACAGACTGA ACCGATCAAA ATCGAGGGGG AGAGGAAGGG TTAACGAAGG TGCAACTGAT ACAGAAGTTC TCTTGGCATC TCCTAGATCA GGTCGTCTAG TTGTCAGAGA TAAGGATCTA TCAAAATTTT CAGATGGCAG AAATGCAGAA GATGTGACCA TATGTCTGGG GAAAATGAAG TCTGGTATTA TGGAGATAGA AAGAGAGGAT GACGATGAAT GCTTTCAAGG TTGCATAATA GGAACGAAAA ACATAATTGA TCTAGTAAAG AGAGCCGTTG GAGCTGCAGA AACGGAAGCT AGAGCTGCCC ATGCTCCTGA TGACGCAGCT AAAGCAGCTG GCGATGCTGC AGCAGAGCTT GTTAAAACTG CTGCTTTGGA GGAATTCAAG TCTTCTGGCA GTGAAGAAGC TGCTGTGTCG GCTGCTACTC GAGCAGCTAT TACAGTCATA GATGCTGCAG AGGTTTCAAG AAATCCTACT TGTGTCACAT CTGATCAGAC AACAGATGTT AGTGAAGTTT CACTTCCAGA TATCGAATCT TTGGCTCAGT TACAAGAAAA ATATTGCATC CAGTGCCTTG AGATACTGGG AGAATATGTC GAGGTTCTCG GGCCTGTACT CCATGAAAAA GGTGTTGATG TATGCATTAT GCTACTGGAA CGTACATCCC AGTTTGATGA TAGTTCTACA GTGTCTCCTT TGTTACCTGA TGTCATGAAG TTAATTTGCG CTTTGGCTGC GCACCGGAAG TTTGCTGCGA TGTTTGTTGA CCGGGGTGGC ATACAAAAAT TACTTGCTGT TCCAAGGGTT TCTGAGACGT TTTATGGTCT CTCATCTTGC TTATACACCA TTGGCTCTCT TCAGGGTATA ATGGAGCGTG TCTGTGCACT TCCATCGGAT CTCATACATC AAGTTGTTAA ATTAGCTATC GAACTTCTCG ACTGTTCCCA GGATCAAGCC AGAAAAAATT CAGCTTTATT CTTTGCTGCT GCTTTTGTCT TCAGAGCCAT TTTAGATGCA TTTGATGCTC ATGATAGTTT GCAGAAACTC CTTGCAATTC TTAAAGATGC AGCCTCAGTT AGAACTGGTG CTAATTCTGA CCGATCAGCT CCTGAAGTCA TGACGTCCTC AGAGAAACAG ATGGCTTTCC ACACGTGTTT TGCTTTGCGC CAGTATTTTA GAGCTCATCT TCTTTTGCTT GTTGATTCAA TCCGTCCTAG CAGAAGTAGC CGAGGTGGTG TGCGAAATGT TCCTAATATA AGGGCAGCCT ATAAGCCCCT TGACATCAGC AATGAAGCTG TTGATGCCAT CTTCCATCAG TTACAGAAGG ACAGGAAGTT GGGTCCGACC TTTGTGAGAA CTCAGTGGCC TGCTGTCAAT AACTTTTTGG CCTCCTCTGG ACATGTTACC ATGTTGGAAC TTTGTCAGAC TCCACCAGTA GACCGTTATC TGCATGATCT ACTTCAGTAT GCTTTTGGGG TTCTTCACAT AGTTACATCA ATACCTGATG GCCGCAAAGC AATTGCGCAT GCCACACTCA GCAACAATCG TGCTGGCATT GCTGTCATTC TGGATGCAGC AAATATTTCC AACAGCATAG TAGACCCTGA GATCATTCAG CCTGCACTAA ATGTCCTAAT CAATCTGGTG TGCCCACCAC CATCATTAAG CAATAAGCCG CCCCTTGCAC AAAATCATCA ACCTGTTCCC GGCCAAGCCA CTACCCGTCC CTCTACTGAT GTTGCTGTAG GTACTCAGTC CACTGGTAAT GCTCCGCAAA CTCCTGTTGC ACCAGCATCT TCAGGTTTGG TTGGGGATCG GAGAATTTTC TTAGGAGCAG GAACTGGTTC TGCTGGCCTT GCTGCTAAGT TGGAGCAGGT TTATCGTCAA GCCCGTGAAG CTGTTCGTGG GAATGATGGT ATAAAAATTC TTTTAAAACT TCTTCAGCCC AGAATATATG TGAATCCCCC TGCTACCCCA GATTGTCTAC GAGCGCTGGC TTGCAGGGTA CTTCTTGGTC TGGCTAGAGA TGATACAATT GCACAAATAC TGACTAAACT TGAGATTGTG ACAAATTCAG GGCATGCGAC TACACTGACA GCCAGCGATG CTGCTACTCC AACACTGAGG CGCATTGAAA GAGCTGCCAT TGCAGCAGCA ACGCCTATAA CTTATGATTC TAAGGAGCTT TTGCTGCTTA TCCATGAGCA CCTCCAGGCA TCAGGTCTTG GTGAAACTGC TTCAGCACTG TTAAAAGAAG CTCAATTAAC TCCTCTACCT TCATTGGCTT CCCCTTCTTC TATTGCATAT TCCTCTACAC AGGAGATGTC TACGCCGCTA GCTCAAGAAC AATGGCCCTC TGGCCGTGCT AACAGTGGAT TTTTCACCAG CAAACCCAAA GTCTGTGCAC ATGACGAAGA TCCTAATTCT AGATGTAATG CGGCTATATC TGCCAAAAAG AAGCATTTGG CTTCCTCGAC ACTGGAGATA CCCACACCAG TAGCACAGCA ACAGTGGCCA TCAGGCCGTG CTAACAGTGG TTTTTTCCCC AGCATACCCA GAATCAATGC ACTTGATGAA GATCCTAGTT CGAGAGGTAA CGCAGCTCCA TCTGCAAAGA AGAAGCAGTT GACTTTCTCA CCCAGTTTTA GTTTGCAGTC ACGAAAGCAA TCTCTCTCCC ATGACGCTCA ACCTCAGTCT ACACAGAGAA TAAATAGTAG TTCGAATTCA GATCCTGCTT GGGCAGATAC ATCAGAAACT GCTGCAGAAT TAGTTTTGAA GAACGACCTT GATGCCGATG CTCAATTTAA GACCCCGATT TCCTTTCCAA GAAAACGGAA ATTGTCTGAG CTTAGAGACC CAGAGTTGTC AGTTCCGGGT AAAAGAATCA ATTTGGGTGA GTTAGGACTA CGATCTCCAG CTTGTCCAAC CACAGCTTCC TTGCGTAGGA ATTCAACCAT TGCGGAAAGC TCAGGTTTGC AAACACCAGC TTCAGCTTTA GATGCCAACC AATCTGGGAG TTCCAGACTG GGCCAGATGA CACCTGCTTC TCAGCTAAGG CTTCCAAGTG ATCCCCAGCC TTCAAATCCA GAACGGTTAT CACTAGACTC CCTTGTGGTT CAGTATTTGA AGCACCAACA CAGGCAGTGC CTGGCTCCAA TCACAACTCT TCCCCCTGTG TCTCTCCTAC ATCCGCATGT CTGTCCTGAA CCTAAACGGT TACTTGAAGC TCCACTAAAC ATCACTGGCC GTCTTGGGAC CCGTGAGCTT CAAAGTTTCT ACAGTGGAGT CCATGGGAAT CGCAGGGATC GTCAATTTGT TTTCAGCAGA TTCAAATCTT GGAGATCTTT CCGGGATGAG ACTGCTCTCT TTACATGCAT TGCACTTCTT GGTGGTACTA ATCATTTAGC AGTCGGTAGT CATGCTGGAG AAATCAAGAT ATTTGAAGCT AGCAGCGGTA CCTTGCTTGA GAGTTTCTCA GGTCACCAGG CTCCGGTTAC GCTTGTTCAG CCGTATGTCT CTGGGGATAC TCAGTTGTTA CTTTCTTCGA GCTCCAGTGA TGTACAGTTG TGGGACGCGT CTTCTATAAC TGGTGGGCCT AGACACTCCT TTGATGGATG CAAGGCTGCA AAATTCAGCA ACTCTGGGCT ACAATTTGCA GCACTTTCTT GTGAAGCATT GACAAAAGAT GTTCTTCTAT ATGATGTACA GACCTGCAGT CCTTGCGATA AACTCACTGA CACAGTCACA TCTTCTCGAA GTAATCCCTA TTCTCTTGTA CACTTCAGCC CTTGTGATAC ACTGATTTTG TGGAATGGTG TTCTCTGGGA CCGCCGTATC CCCGAGTCTG TCAGTCGGTT TGATCAATTT ACTGATTATG GCGGCGGTGG TTTTCATCCT TCTAGGAACG AGGTGATCAT AAACTCAGAG GTCTGGGACA TGAGGAATTT CAAGCTTCTT CGAAGTGTAC CATCACTGGA CCAGACAGCT ATTACGTTCA ACTCCAGGGG AGATGTTATA TACGCAATGC TGAGGAGAAA CATCGAAGAC GTTATGTCTG CAGTTCACAC ACGCCGTGTG AAACATCCCT TGTTTGCTGC TTTCCGCACT CTTGATGCGA TCAACTACTC AGACATTGCC ACTATACCTG TGGACCGATG TCTTCTTGAC TTTGCCACAG AACCAACAGA TTCGTTCCTT GGACTGATCA CAATGGAAGA CCAAGAAGAT ATGTTTTCCT CGGCCAGGAT GTATGAGATT GGTAGACGGA GGCCAACAGA TGATGACTCG GATCCCGATG ATGATGATGA GACGGACGAT GAAGATGAAG ATGATGAAGA CGAGGAAGAT GACCTGGACC GAATTCTGGG ACTAGGTGTA GACGATAGCG ATAGTGGGGA TGATGACCTT AGCAGCGACG ACAATGAAGA TAGTGTGAGC GATTTTGATG AAGGAGGAGA GATTCTTCTT GACGGTCTTG ACGGTGGCTT TATGGGGATT ATAGAAGGTG AGGATGAAGA CGATGATAAT GGTGGTGATG GTGAGGATGA TGATGATGAC GGTGAGATGC AGGATTTCAT GAGCAGTGGC GAAGAAGATG ATTATAGAGA CAATATTCGT TCTTCCTAAG GTTTTTTATA TCTTGTTTAC TTTTGAGTTC TACAGATCTC TAAGATGGAT TTTTACTATC CAAAGTTTTG ATGATAAGTT CTTGTATTAT TTTTTCTTTG TTAAG |
| Length | 5805 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 4182985.. 4190332 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G31160.1 |
| Description | DDB1-CUL4 associated factor 1 |
| TAIR curator summary | Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development. |
| Alias | [DCAF1][DDB1-CUL4 associated factor 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg891152 | aconitase 3 |
| 5 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 6.63325 |
Ahg485730 | UDP-glucuronic acid decarboxylase 1 |
| 6.78233 |
Ahg946634 | 5'-AMP-activated protein kinase beta-2 subunit protein |
| 9.27362 |
Ahg924484 | NAD(P)-binding Rossmann-fold superfamily protein |
| 10.5357 |
Ahg928634 | RAB geranylgeranyl transferase alpha subunit 2 |
| 11.6619 |
Ahg488220 | |
| 12.6491 |
Ahg489475 | TCP-1/cpn60 chaperonin family protein |
| 18.8944 |
Ahg489225 | phosphate deficiency response 2 |
| 19.8997 |
Ahg480804 | BEL1-like homeodomain 7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|