Detail



ID : Ahg891508

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891508|Al_scaffold_0007_3494
Sequence
ATGGCTTCTT CTTCTTCTTC TTCTTCGTTT CACATAAGGA GATACCATGT CTTTCCGAGC TTCCACGGTG AAGATGTCCG TAGAGGGTTT CTCAGTCATT TGCACTATCA TTTTGCAAGC AAAGGTATCA TGACGTTCAA TGATCAGAAG ATCGAGAGAG GCCATACGAT CGGACCTGAG CTCGTACGAG CGATTAGAGA ATCTAGAGTC TCGATTGTGG TGCTCTCGAA GAGGTACGCT TCTTCCAGCT GGTGTTTAGA TGAACTGCTT GAAATCTTGA AGTGCAAAGA AGATCATGGG CAGATTGTGT TGACCATTTT TTACGAAGTT GATCCGTCCG ATGTACGGAA ACAGAGGGGA GACTTCGGGA GCGCTTTTGA GATAACTTGT CAAGGGAAAC CGGAGGAGGT GAAGCTGAGA TGGAGCAATG CTTTGGCACA TGTTGCAACC ATTGCTGGGG AACATTCTCT TCATTGGCCT AATGAAACAG AGATGATCCA AAAGATTGCT ACAGATGTTT CAAACAAACT CAATCTTACA CCGTTGAGGG ATTGTGACGG GATGGTGGGA CTTGAAGCTC ACTTGACAAA ACTGCACTCT TTGTTATGGC TCGGTTGTGA TGATGCAAAG CCAAAGATGA TTGGAATTTG GGGTCTTGCA GGGATTGGTA AGACTACCAT TGCTAGAGCT TTATTCAACA GACTCTCTAG CAGTTTTCAG CTTAATTGTT TTATGGACAA CCTCAAGGGA AGTTCTAAGA GCGTAATGGA TGTTGATGAT TTTTATTCCA AATTGTCTCT GCAAACCCAA CTTCTGTCTA AGATTTTGAA CCAGGAGGAT ATGAAGACAT ATGATTTAGG TGCAATAAAA GAATGGCTAC AAGATCAAAG AGTGCTTATC ATTCTTGATG ATGTAGATGA TCTAGAGCAA TTAGAGGTCT TGGCTAAAGA ACTTTCTTGG TTTGGTTCTG GAAGTCGGAT CATCGTTACC ACAGAAGATA ATAAGATTTT GAAGGCACAT GGGATTCAGG ATATCTACCA TGTGGATTAT CCATCCGAGA AAGAAGCTCT TGAGATCTTA TGTCTATATG CTTTCAAACA ACGCTCTGTA CCATATGGTT TTGAAGAGCT TGCCAATAAA GTAGCTGCGT TTTGCGGTAA ACTTCCATTA GGCCTTTGTG TTGTGGGTTC ATCTCTGCAT GGTGAGACCA AATACGAGTG GGAACTTCAA TTATCTAGGA TCAAAGCTAG TCTTGATGGA AAAATCGAGA CCATTTTAAA AGTGGGATAT GACAGATTGT CAGAGAAAGA TCAATCTCTA TTCCTTCACA TTGCATGCTT CTTCAACAAT GAAGTCGTTT TGCTCCTAGC CGATAAATCT CTCGTGCATA TATCTACCGA TGGGCGTATA GTGATGCACC ACTATCTACT ACAAAAACTG GGTAGACAGA TAGTTCTTGA GCGTCAATTT TTAATTGAGG CCGCCGAGAT TCGTGATGTA CTGACAAACA AAACAGGTAC TGGATCAGTC ATAGGTATAT CATTTGATAC ATCCAAGATC GGAAAAGTTT CTGTAAGTAA GGGTGCTTTT GAAGGAATGT GTAATCTCCA GTTCCTAAGA ATCTATAGTA GTTTGTTTGG TGGTGAAGGT ACTTTGCAAA TAGCAAAATC TATGAAGTAT CTACCCGAGA ATCTTAAGTT ACTACATTGG GAACATTACC CAAGAAAAAG TCGTCTTCCT CTGAGATTCC AGCCGGAACG TCTCGTGGAA CTCCATATGC CACACAGCAA TCTCGAGGGA GGAATCAAGC CCCTTCCTAA CCTCAAGAGC ATAGATCTTA GCTTTTCCTC TAGATTGAAA GAAATCCCAA ATCTTTCAAA TGCTACTAAT CTCGAGACAT TGACACTTGT GAGGTGCACA AGTTTGACAG AGCTTCCCTT CTCTATTTCG AATTTACACA AACTGAGTAA GTTGAAGATG AGGGTTTGCG AAAAGCTAAG AGTTATTCCC ACCAACATTA ACTTAGCATC TCTTGAGGAA GTCGACATGA ATTATTGCTC GCAATTGAGT AGTTTTCCAG ATATCTCCAG TAACATTAAG ACTCTTGGTG TCGGAAATAC AAAGATAGAA GATGTCCCTC CATCAGTTGC TGGATGTTGG TCTCGTCTTG ACTGCCTTGA GATTGGCAGC AGAAGCCTCA ATAGATTAAC ACATGCCCCA CATAGTATAA CTTCGCTAGA TCTTAGCAAC AGCAATATAA AGAGGATTCC AGATTGCGTC ATAAGTCTCC CGCATCTAAA AGAACTTATC GTCGAAAACT GCCAAAAGCT CGTGACAATT CCGGCTCTTC CCCCGTCGCT CAAGTCCCTA AATGCAAACG AATGTGTATC ACTCGAGAGA GTATGTTTCT ATTTCCATAA CCCAACCAAG ATACTCACAT TCTACAACTG TTTGAAACTG GATGAAGAAG CAAGAAGAGG AATCATACAA CAATCAATTC ACGATTACAT ATGCTTACCA GGCAAAAAAA TCCCTGCAGA GTTCACTCAG AAAGCTACAG GGAAATCCAT AACTATCCCT CTGGCTACGG GTACTCTCTC TGCTTCCTCA AGGTTTAAGG CTTGCTTTCT GATTTCACCA ACTATGGGCT ACCAAGGATA TCTTTATATA AGTTGTAGTC TAAGAAGCAA AGGTGGTGTT ACAGATTACA ACTGCAATTC AGTACGGCTT TCAGATATGG CTCCTCGGTC AGAACATCTG TTTATATTTG ATGACTTGTT TGGCCAACGA TACAGATGGC ATAAAGTGGA TGTGACTATG AGTGAGATTA TATTGGAGTT CAGCTCCATA GACAAGATTA TTGAGTGTGG TGTACAAATC ATGACAGAGG AAGCTGAGGG TAGCAGCAGC AGCGAATTGG ACAACTTTGA AACTGAAATT AGCAGAAGCC AAGTGGACAA CTATGAAACT GAGAGTAGCA GGCTAGCAGC AGCAGCGAAG GTGGAGATGG TGATGGAGAC TATGAAGCAG AAGGTTTCAA GTTCTCTCAT GTTGAAAATA TCAAAACCAG TAAACATAGG TTTTAGGATT TGGGTTAGGA AACTTGGTCT GAAAGAGAAG AAGATGAATA CGAAAGAGCA GAATTCTCGT GGAGTCTCAT GA 
Length3162
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20193810.. 20197358
Download Sequence
A.thaliana
AGI-codeAT5G41550.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg475964
9.16515 Ahg485566 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
9.69536 Ahg327329 Disease resistance protein (TIR-NBS-LRR class) family
13.9642 Ahg950854 exocyst subunit exo70 family protein E2
14.1067 Ahg913087 PLATZ transcription factor family protein
19.2873 Ahg483556 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
22.2486 Ahg478682 multidrug resistance-associated protein 3
23.2379 Ahg490404 WRKY family transcription factor
26.8328 Ahg919597 fatty acyl-ACP thioesterases B
28.3549 Ahg935792 receptor-like kinase in in flowers 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression