Detail



ID : Ahg485566

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485566|fgenesh2_kg.5__1558__AT3G52060.2
Sequence
ATTATTTAAA TAGAAAGAGA AGAGCCCCAC GTATAACAAA TAGCGATAGA GCAACTGTGT CGATTGTCCC ACATATTTTA AAATATTTCA CGTGTCCCCA TTTTGCTGAC GTCATTATTC TCCCTTTTTC CTTTTTATTG TCACATCATA ATTTTTTATC AATCATCTTC TTCTTCTTCT TCTTCTTCCT CTGAGAAATT CTGTGTTGTT GTTTCAGAGA TGTTCTCTTC TTCTACACTC GTTTATTCTC TATCTCTCTT CCTCTCTCTT TCTCTTCTCT TCTTCCTCTC ACCACACATC CTTCTCTCTT CCTCTAACCT CATTTCCACC GCCGATGACC TAGACGACCT CTCTCTCTTC CACCGCGCCG CCGTCTCTTC CTCCACCAAC AACCGCCGTC TCATCTCCCT CTCTCCAAAT CCTCCCCCTA AGATCGCTTT CCTCTTCCTA ACAAACTCCG ATCTAACCTT CTTACCTCTC TGGGAAAGCT TCTTCCAAGG TCACCAAGAT CTCTACAATG TTTACATCCA CGCAGATCCA ACCTCCTCCG TATCTCCGCT TCTCGATTCA TCGTCAATCA ACGCTAAATT CATCCCGGCG AAAAGAACCG CACGAGCTTC TCCGACGCTA ATCTCCGCCG AGCGACGATT ACTAGCAAAC GCAATCCTCG ACGATCCTAA CAATCTCTAT TTCGCTTTAA TCTCACAACA CTGCATCCCT CTCCATTCCT TCTCTTACAT CCACAACCAC CTCTTCTCCA CCAACTCCGA TCATCACCAA AGCTTCATCG AGATCCTCTC CGATGAACCT TTTCTTCCGA AACGATACAA CGCAAGAGGC GACGACGCGA TGCTTCCTGA GATCCGGTAC CAAGACTTCC GTGTTGGATC TCAGTTCTTC GTTTTAGCGA AACGTCATGC TCTAATGGTG ATCAAAGAGA GAAAACTATG GAGGAAATTC AAATTACCAT GCCTTGATGT TGAATCTTGT TACCCTGAAG AACATTATTT TCCGACTTTG TTGTCTCTTG AGGATCCTAA AGGATGTAGT CACTTCACAC TCACACGTGT TAATTGGACC GGTAGTGTTG GTGGTCATCC TCACACGTAC GATGCCTCTG AGGTCTCGCC GCAGCTGATT CACTCGCTGC GGAGATCTAA TTCGAGTTTA GACTATTTCT TCGCCCGAAA ATTCACGCCG GAGTCATTGC AACCTCTTAT GGAGATTGCA GATGCTGTGA TCTTTAGGGA TTGAATCGGT GAAAGTAAAT TAGGTAAATC ACTGAAATCT GAATCTGAAT GTGTATATAT GAATTCAGTT TGAGAGTTTT TGTTATTGTG TTGTGTTTCA GGTTTCAGGT ATCATCATCA TCAAGAAGGT TTAGGAACAA GTTTGTATTG GCGCTCGAAG AAGAGTGGCA AATAAAAGAT GAAACTCTGT GTGTGTGTGT GAAAATTGCT GTGTCTTTTA AGCTTTTGTG TGTCATTTAG GGAAGGTTAG ATGGAAGTTG GATGTAAAAA AAAATGTAAA TAGAGAGAGC CCCAAAGGCA AAGTGAGAGC ATCATCATTA AGATAAGCCA AATAGGCTTT CTTTTGTATT TCAGCTCCTT TCCACGGGAG AGAGAGGGAA TTGCAAAGGG TTATTCCCTC TCTTTTGTTT CGATTAAGTG TGAATGAAAA AATCTTTGGT ATTTC 
Length1695
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15063507.. 15065272
Download Sequence
A.thaliana
AGI-codeAT3G52060.1
DescriptionCore-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
TAIR curator summary
Alias[AtGnTL][GnTL][beta-1,6-N-acetylglucosaminyl transferase-like]
Gene coexpression
MR
MR Locus Description
9.16515 Ahg891508 Disease resistance protein (TIR-NBS-LRR class) family
14.2829 Ahg338999 Protein kinase superfamily protein
16.2481 Ahg490828 LisH/CRA/RING-U-box domains-containing protein
21.2132 Ahg481396 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related
26.8328 Ahg478936 RING/U-box superfamily protein
32.0312 Ahg486680 Protein with RING/U-box and TRAF-like domains
33.3167 Ahg472131 inter-alpha-trypsin inhibitor heavy chain-related
37.6829 Ahg475482 Arabidopsis thaliana protein of unknown function (DUF794)
39.95 Ahg480102 Pyridoxamine 5'-phosphate oxidase family protein
46.0869 Ahg495325 conserved peptide upstream open reading frame 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression